Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.61□□□□□ -1.67
EFCC1Q9HA90 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 ZNF962P-201ENST00000443465 3140 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC116096.1-201ENST00000566804 2314 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 Y_RNA.81-201ENST00000362997 102 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 SNORD35B-201ENST00000363660 87 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU6-105P-201ENST00000363909 104 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU6-335P-201ENST00000364563 113 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU6-1175P-201ENST00000365200 107 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 Y_RNA.446-201ENST00000384178 104 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU6-72P-201ENST00000384285 79 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MIR153-2-201ENST00000385225 87 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU2-51P-201ENST00000410708 197 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 POLR2KP2-201ENST00000438155 177 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 SSXP4-201ENST00000451349 245 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC010285.1-201ENST00000470580 392 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC106707.2-201ENST00000484182 374 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC010265.1-201ENST00000513509 211 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC074133.1-201ENST00000515696 183 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNU1-103P-201ENST00000516502 125 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RNA5SP179-201ENST00000517284 121 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MED28P6-201ENST00000558776 231 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MIR4308-201ENST00000580634 81 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MIR3922-201ENST00000585192 84 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 AC091167.4-201ENST00000605079 184 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 RMST_6.1-201ENST00000611980 203 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 MIR486-1-201ENST00000612171 68 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 NOL8P1-201ENST00000508336 3529 ntBASIC4.6□□□□□ -1.67
EFCC1Q9HA90 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.6□□□□□ -1.67
EFCC1Q9HA90 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 RNA5SP97-201ENST00000365006 84 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 SNORD6-201ENST00000365444 73 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 SNORD50.2-201ENST00000365465 70 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 MIR186-201ENST00000384988 86 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 MIR487A-201ENST00000385009 80 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 AL356535.1-201ENST00000440335 398 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 AF186996.7-201ENST00000492781 209 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 RNU6-1114P-201ENST00000516022 107 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 RNU6-567P-201ENST00000516746 107 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 RNU7-143P-201ENST00000516781 65 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 MIR4282-201ENST00000583613 67 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 AC020895.1-201ENST00000595362 272 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 KLKP1-201ENST00000595979 403 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.59□□□□□ -1.67
EFCC1Q9HA90 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
EFCC1Q9HA90 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
EFCC1Q9HA90 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
EFCC1Q9HA90 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 MIR410-201ENST00000362222 80 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNU6-961P-201ENST00000363893 105 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 Y_RNA.331-201ENST00000365267 102 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNU6-1130P-201ENST00000365434 107 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNU6-417P-201ENST00000384712 107 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 HLFP1-201ENST00000402375 499 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNU6-1001P-201ENST00000411265 100 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 SNORA27.4-201ENST00000516650 95 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 RNA5SP291-201ENST00000517222 105 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 MIR3651-201ENST00000630427 90 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
EFCC1Q9HA90 AC004925.1-201ENST00000624256 2706 ntBASIC4.58□□□□□ -1.68
EFCC1Q9HA90 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
EFCC1Q9HA90 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms