Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNU6-1144P-201ENST00000384247 104 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 SNORA67.2-201ENST00000384300 149 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 MT-TT-201ENST00000387460 66 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 RNA5SP76-201ENST00000516277 87 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 RN7SL176P-201ENST00000580352 264 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 FAM27B-201ENST00000610601 213 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 AL773545.4-201ENST00000637262 310 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 AL513478.4-201ENST00000641636 310 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHOX2BQ99453 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHOX2BQ99453 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.86□□□□□ -1.63
PHOX2BQ99453 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHOX2BQ99453 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
PHOX2BQ99453 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHOX2BQ99453 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHOX2BQ99453 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHOX2BQ99453 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHOX2BQ99453 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHOX2BQ99453 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 MIR586-201ENST00000385035 97 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 AC104333.2-201ENST00000422630 192 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 RPS4XP2-201ENST00000458402 793 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 AC008739.3-201ENST00000603262 127 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 MIR548AY-201ENST00000617669 107 ntBASIC4.85□□□□□ -1.63
PHOX2BQ99453 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHOX2BQ99453 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PHOX2BQ99453 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHOX2BQ99453 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHOX2BQ99453 Y_RNA.40-201ENST00000362645 93 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 Y_RNA.43-201ENST00000362670 111 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 RNY4P18-201ENST00000391107 89 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 RNU6-588P-201ENST00000410281 105 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 RPL19P16-201ENST00000433839 588 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 SCARNA10-201ENST00000459255 330 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 RNU7-23P-201ENST00000459465 62 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 S100A11P1-201ENST00000477525 312 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 AC091868.1-201ENST00000508746 304 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.84□□□□□ -1.63
PHOX2BQ99453 AC127455.1-201ENST00000565496 145 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHOX2BQ99453 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.63
PHOX2BQ99453 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHOX2BQ99453 SCARNA15-201ENST00000607520 4325 ntBASIC4.84□□□□□ -1.64
PHOX2BQ99453 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHOX2BQ99453 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHOX2BQ99453 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHOX2BQ99453 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHOX2BQ99453 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 MIR491-201ENST00000384877 84 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 SNORA77-201ENST00000408716 125 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 AC245047.4-201ENST00000433189 144 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 snoU13.28-201ENST00000459235 104 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 RNU7-115P-201ENST00000516433 55 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 RNU7-116P-201ENST00000516940 62 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 RNU1-30P-201ENST00000606575 163 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 uc_338.7-201ENST00000621834 124 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 AC039056.2-201ENST00000622261 511 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 U6.95-201ENST00000636931 70 ntBASIC4.83□□□□□ -1.64
PHOX2BQ99453 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.83□□□□□ -1.64
PHOX2BQ99453 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 AL022322.2-201ENST00000624072 20397 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms