Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SNORA51.4-201ENST00000364993 124 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 AC107934.2-201ENST00000518653 310 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 TRAV8-5-201ENST00000537369 341 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 RPL23AP97-201ENST00000568955 471 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 RPL23AP91-201ENST00000569211 455 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 AC024220.1-201ENST00000603675 484 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 Z73965.1-201ENST00000623412 2297 ntBASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.31□□□□□ -1.56
MS4A4AQ96JQ5 AC058791.1-201ENST00000608412 3198 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RN7SKP186-201ENST00000365371 303 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RNU6-1152P-201ENST00000384576 107 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 MIR29B2-201ENST00000385055 81 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 COX5BP7-201ENST00000414780 274 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RBMY2UP-201ENST00000453474 324 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 HMGN2P9-201ENST00000476875 229 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RNA5SP20-201ENST00000515976 84 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RNA5SP468-201ENST00000516782 93 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RNU6-928P-201ENST00000516876 104 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 RNU6-365P-201ENST00000517113 106 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 AC040958.1-201ENST00000561102 201 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 AC069200.1-201ENST00000609511 323 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A4AQ96JQ5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 SPRR2C-201ENST00000290702 219 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 MIR372-201ENST00000362225 67 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 SNORA63.5-201ENST00000363548 123 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 Y_RNA.203-201ENST00000364106 102 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 RNU6-1138P-201ENST00000365359 106 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 AL133475.1-201ENST00000404414 305 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 AL590004.2-201ENST00000404787 371 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 AC021205.2-201ENST00000480069 347 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 PARP4P3-201ENST00000510265 317 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 Pinc.1-201ENST00000616452 154 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 AC134878.1-201ENST00000619901 243 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 AC005086.4-201ENST00000623065 213 ntBASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
MS4A4AQ96JQ5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 AC103988.1-201ENST00000566382 2177 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 RNY4P6-201ENST00000363667 96 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 MIR300-201ENST00000401138 83 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 HMGN2P21-201ENST00000447764 270 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 RN7SL542P-201ENST00000467147 294 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 OR9P1P-201ENST00000496431 281 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 AC091152.3-201ENST00000604227 325 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 AL137067.1-201ENST00000615933 120 ntBASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.28□□□□□ -1.56
MS4A4AQ96JQ5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 ADAM5-202ENST00000399789 1942 ntBASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
MS4A4AQ96JQ5 MIR181A2-201ENST00000384863 110 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms