Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 UBE2D3P4-201ENST00000441973 436 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC104806.1-201ENST00000508720 308 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC234772.3-201ENST00000602277 528 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL670379.2-201ENST00000604983 252 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL670379.4-201ENST00000605279 254 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC099842.1-201ENST00000619919 596 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 Z69720.2-201ENST00000624755 279 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 MIR1248-201ENST00000629190 106 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 U4.7-201ENST00000638126 106 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 MTND4P4-201ENST00000439033 1366 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 MTND5P17-201ENST00000418405 1603 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 RNU6-1285P-201ENST00000363480 105 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 RNA5SP501-201ENST00000410990 112 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 RNA5SP111-201ENST00000411386 101 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC108667.1-201ENST00000428618 249 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC009646.1-201ENST00000510455 318 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 SNORA3.4-201ENST00000515969 96 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 COPS8P3-201ENST00000526024 482 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC022880.1-201ENST00000534017 973 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC090616.2-202ENST00000584248 222 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 RMST_6.1-201ENST00000611980 203 ntBASIC1.53□□□□□ -2.16
ECHDC3Q96DC8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
ECHDC3Q96DC8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 RNY1P12-201ENST00000364251 105 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 MIR597-201ENST00000384968 97 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AL033519.2-201ENST00000403958 392 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 Y_RNA.597-201ENST00000410463 100 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 RPL39P29-201ENST00000447779 157 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 MTCYBP1-201ENST00000454315 1119 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 BZW1P2-201ENST00000473537 826 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC103987.3-201ENST00000582071 292 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC090578.1-201ENST00000604955 591 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC092354.1-201ENST00000606057 376 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AL603839.4-201ENST00000624658 1005 ntBASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ECHDC3Q96DC8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 SNORA62.1-201ENST00000364287 154 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 RNU5E-7P-201ENST00000365290 117 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 RNU6-1222P-201ENST00000384615 107 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 OR6C66P-201ENST00000414917 930 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC073614.1-201ENST00000438690 650 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AL122001.1-201ENST00000457027 370 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 RNU5F-2P-201ENST00000516066 82 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AP002453.2-201ENST00000533503 320 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC022022.2-201ENST00000602989 360 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC018889.1-201ENST00000605372 397 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC011155.2-201ENST00000623202 216 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.51□□□□□ -2.17
ECHDC3Q96DC8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms