Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC018630.3-201ENST00000542637 96 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 EIF1P4-201ENST00000572664 335 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 MIR5583-1-201ENST00000580941 59 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC091135.1-201ENST00000585943 307 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RPL30P11-203ENST00000598995 310 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC123912.5-201ENST00000605470 343 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 RNU6-6P-201ENST00000606623 107 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC103810.6-201ENST00000606708 136 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC103591.3-201ENST00000608684 209 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 Z82243.1-201ENST00000609432 473 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 AC103705.1-201ENST00000619013 241 ntBASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.74□□□□□ -2.13
RPUSD4Q96CM3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 SNORA69-201ENST00000383895 132 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RNU6-38P-201ENST00000384085 107 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 MIR483-201ENST00000385070 76 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 CALM2P3-201ENST00000400429 449 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AL606923.1-201ENST00000406616 190 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 Z92545.1-201ENST00000411782 234 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 MTCO3P41-201ENST00000414801 328 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 ARL5AP1-201ENST00000418991 388 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RPL7P54-201ENST00000438336 674 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RNU6-333P-201ENST00000459117 107 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RNU6-377P-201ENST00000515965 102 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 SNORA14.1-201ENST00000516113 141 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 CENPUP1-201ENST00000526649 1202 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 CBX3P7-201ENST00000532876 502 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC064807.4-201ENST00000607201 407 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC015540.1-201ENST00000615828 501 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 DUXAP9-208ENST00000622815 614 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AP000560.1-201ENST00000624150 1937 ntBASIC1.73□□□□□ -2.13
RPUSD4Q96CM3 AC121333.1-201ENST00000567488 2709 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP160-201ENST00000364866 120 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 RNU6-336P-201ENST00000364891 107 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 Y_RNA.436-201ENST00000384097 102 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 SNORD116-4-201ENST00000384733 96 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 MIR561-201ENST00000385216 97 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC016907.1-201ENST00000419483 435 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 RPL23AP83-201ENST00000434984 473 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC243964.1-201ENST00000441814 261 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC124916.1-201ENST00000444020 547 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC108938.1-201ENST00000451204 136 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC140059.1-201ENST00000489238 361 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC018868.1-201ENST00000491307 315 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 RN7SL636P-201ENST00000497504 294 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC009646.1-201ENST00000510455 318 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 RNU4-29P-201ENST00000515943 174 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC115990.1-201ENST00000526957 301 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 HMGB1P33-201ENST00000563485 527 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC093249.1-201ENST00000567049 203 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC046143.2-201ENST00000609789 160 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC009831.4-201ENST00000620744 325 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 MIR6132-201ENST00000622083 109 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC068137.3-201ENST00000639191 341 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 AC099654.12-201ENST00000639868 649 ntBASIC1.72□□□□□ -2.13
RPUSD4Q96CM3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL139413.1-201ENST00000421309 217 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 SNAP23P1-201ENST00000433229 246 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RNU7-138P-201ENST00000459479 64 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC087884.1-201ENST00000469738 328 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC068781.1-201ENST00000488231 618 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms