Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL133215.3-201ENST00000609801 448 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 MIR6852-201ENST00000621699 66 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 AC241585.2-209ENST00000638217 143 ntBASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP4CQ96CF2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CHMP4CQ96CF2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SNORA5B-201ENST00000363786 132 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 MIR521-1-201ENST00000384902 87 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 ATG3P1-201ENST00000419507 911 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AP004217.1-201ENST00000480579 346 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AP001025.1-201ENST00000486139 332 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AC097462.2-201ENST00000504623 481 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 RN7SKP132-201ENST00000516001 208 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 RNU6-1016P-201ENST00000516689 94 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 CKS1BP7-201ENST00000522230 235 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 IMMP1LP2-201ENST00000552954 492 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 AC090897.2-201ENST00000581715 130 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 RPS15AP11-201ENST00000594193 385 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.46□□□□□ -1.86
CHMP4CQ96CF2 MTND5P30-201ENST00000452896 1731 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 Y_RNA.482-201ENST00000384377 111 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RNU6-692P-201ENST00000384496 107 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MIR544A-201ENST00000384855 91 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MIR634-201ENST00000385208 97 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 SNORD88.1-201ENST00000408684 91 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MIR1289-1-201ENST00000408836 144 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RNA5SP492-201ENST00000411330 114 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 Z82205.1-201ENST00000428456 297 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MTND3P9-201ENST00000429526 346 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AL139132.1-201ENST00000431587 344 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RPL21P2-201ENST00000440049 481 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC243964.1-201ENST00000441814 261 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC007969.2-201ENST00000441891 191 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RPL36AP48-201ENST00000485521 314 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RPL22P13-201ENST00000493291 347 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 ACA59.1-201ENST00000515966 143 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 RNA5SP76-201ENST00000516277 87 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 Y_RNA.675-201ENST00000516389 149 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AP005902.1-201ENST00000521358 186 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AL355375.2-201ENST00000574825 175 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MIR4765-201ENST00000585007 77 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 POLR3GP2-201ENST00000588366 668 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AC016727.1-205ENST00000605437 569 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 MIR7106-201ENST00000612419 65 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 AL359854.1-201ENST00000614203 1594 ntBASIC3.45□□□□□ -1.86
CHMP4CQ96CF2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL109809.4-201ENST00000603520 2185 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 SNORD114-19-201ENST00000363072 75 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RNU4-73P-201ENST00000363164 141 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 Y_RNA.387-201ENST00000383918 102 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RNU6-622P-201ENST00000384272 103 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 Y_RNA.474-201ENST00000384341 102 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL512633.1-201ENST00000399931 655 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL451074.5-201ENST00000415894 435 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 Z98742.2-201ENST00000431564 187 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RPS26P21-201ENST00000475397 348 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RNU6-559P-201ENST00000516151 98 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 SNORA31.6-201ENST00000516241 130 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RNU6-277P-201ENST00000516272 106 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 GLYCAM1-201ENST00000546596 285 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 CPDP1-201ENST00000579660 283 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 AL117336.2-201ENST00000602435 335 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 MIR3976-201ENST00000606807 139 ntBASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms