Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC005668.1-201ENST00000571142 476 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC091135.1-201ENST00000585943 307 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AL670379.10-201ENST00000604330 253 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AL670379.9-201ENST00000605428 253 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC009994.1-201ENST00000606889 253 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-91P-201ENST00000607774 107 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC064836.2-201ENST00000609491 462 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 AL133216.2-202ENST00000634512 349 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 TPTEP1-208ENST00000636884 213 ntBASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SLC44A1Q8WWI5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 Y_RNA.184-201ENST00000363884 108 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 SNORD116-20-201ENST00000384529 92 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-1106P-201ENST00000390845 107 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AL445529.1-201ENST00000398713 389 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AL139396.1-201ENST00000421137 167 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 RPS15AP10-201ENST00000432472 382 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AL031274.1-201ENST00000450334 232 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC103851.1-201ENST00000506833 274 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 FGF7P4-201ENST00000509595 295 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC096745.1-201ENST00000509945 370 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 RN7SKP132-201ENST00000516001 208 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AP005639.2-201ENST00000527592 928 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC009314.1-201ENST00000603871 304 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 uc_338.15-201ENST00000615470 191 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 AC138627.2-201ENST00000624202 601 ntBASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A1Q8WWI5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 Y_RNA.142-201ENST00000363491 102 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 Y_RNA.263-201ENST00000364659 114 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-827P-201ENST00000365553 106 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-95P-201ENST00000384697 107 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 MIR548K-201ENST00000408406 116 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-1037P-201ENST00000459571 107 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC107626.1-201ENST00000471084 183 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU5F-8P-201ENST00000515941 111 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNU6-507P-201ENST00000516045 100 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 BNIP3P16-201ENST00000589779 534 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AL121917.1-203ENST00000605534 577 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC063943.3-201ENST00000615562 356 ntBASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.59□□□□□ -1.99
SLC44A1Q8WWI5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -2
SLC44A1Q8WWI5 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
SLC44A1Q8WWI5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 Y_RNA.70-201ENST00000362886 110 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 RNU6-428P-201ENST00000362942 107 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 RNU6-336P-201ENST00000364891 107 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 Y_RNA.339-201ENST00000365325 102 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 MIR9-1-201ENST00000385198 89 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC074117.2-201ENST00000417130 397 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 MTND1P11-201ENST00000456661 876 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AL441985.1-201ENST00000457727 251 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC130509.1-201ENST00000464158 433 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 MTND5P5-201ENST00000503764 376 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.58□□□□□ -2
SLC44A1Q8WWI5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 Y_RNA.682-201ENST00000516457 100 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC105029.1-201ENST00000520250 669 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC104576.1-201ENST00000524225 88 ntBASIC2.58□□□□□ -2
SLC44A1Q8WWI5 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms