Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 uc_338.15-201ENST00000615470 191 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC022079.1-201ENST00000621546 602 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 KPNA2P1-201ENST00000458289 1591 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AL390237.1-201ENST00000404226 1415 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 MTND4P23-201ENST00000447723 1363 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 SNORA16B-201ENST00000364674 135 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 RNA5SP240-201ENST00000365355 128 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 SNORD23.1-201ENST00000408212 104 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 RNU2-9P-201ENST00000410194 145 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 RNU2-23P-201ENST00000410545 195 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 MTATP6P17-201ENST00000431030 672 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC016691.1-201ENST00000441321 413 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC009238.1-201ENST00000442165 424 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC009237.6-201ENST00000446969 424 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC006512.1-201ENST00000468816 291 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AL121594.1-201ENST00000475906 575 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 MTCYBP40-201ENST00000509390 1135 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC010486.3-201ENST00000511602 785 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC074344.1-201ENST00000512823 224 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC104136.1-201ENST00000512969 394 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 SNORA48.11-201ENST00000517015 89 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 MTCO2P4-201ENST00000517968 247 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC109329.1-201ENST00000518744 317 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AP002963.1-201ENST00000530590 184 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01560Q8TB33 SUB1P2-201ENST00000556401 297 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC233702.2-202ENST00000562547 291 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 MIR4703-201ENST00000577728 79 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC119751.7-201ENST00000600494 245 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AC109347.2-201ENST00000610220 349 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AL031601.2-202ENST00000622650 282 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 AP003400.5-201ENST00000624827 617 ntBASIC1.51□□□□□ -2.17
LINC01560Q8TB33 Y_RNA.159-201ENST00000363674 87 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 RNU5E-7P-201ENST00000365290 117 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 RNU4-52P-201ENST00000384209 138 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 OR9R1P-201ENST00000412200 877 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AL365400.1-201ENST00000431854 640 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 MTND1P18-201ENST00000448191 573 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 RNU6-956P-201ENST00000458868 103 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 RPL30P12-201ENST00000474666 353 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 SNORA4.4-201ENST00000515921 135 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC118273.2-201ENST00000532092 465 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 IMMP1LP2-201ENST00000552954 492 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AL391840.1-201ENST00000571144 367 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 MIR4419B-201ENST00000577260 68 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC110760.3-201ENST00000598794 467 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC008945.2-201ENST00000606056 604 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AL161423.1-201ENST00000613700 262 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 AC072046.2-201ENST00000618366 268 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 Z69720.2-201ENST00000624755 279 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 ELL2P3-201ENST00000457883 1602 ntBASIC1.5□□□□□ -2.17
LINC01560Q8TB33 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 Y_RNA.324-201ENST00000365165 102 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 SNORA25B-201ENST00000365507 128 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 RNU6-606P-201ENST00000384721 111 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 U3.40-201ENST00000408706 208 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 RNA5SP390-201ENST00000410191 113 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 RNU4-46P-201ENST00000410818 138 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 RNU2-40P-201ENST00000410833 196 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 EDDM3CP-201ENST00000415977 425 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AP1B1P2-201ENST00000416196 106 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AL358453.1-201ENST00000422522 250 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC007969.2-201ENST00000441891 191 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 MTCO1P19-201ENST00000443487 500 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC006026.2-201ENST00000457376 180 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 SNORA31.25-201ENST00000517242 134 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AP005435.4-201ENST00000529514 284 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC068790.2-201ENST00000602601 557 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC097372.5-201ENST00000623665 376 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 AC097520.1-201ENST00000624435 385 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 ZNF680P1-201ENST00000436625 1469 ntBASIC1.49□□□□□ -2.17
LINC01560Q8TB33 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01560Q8TB33 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01560Q8TB33 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC01560Q8TB33 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
LINC01560Q8TB33 AC006026.1-201ENST00000444025 1803 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms