Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.78□□□□□ -1.96
LMO3Q8TAP4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.78□□□□□ -1.96
LMO3Q8TAP4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.97
LMO3Q8TAP4 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 MIR412-201ENST00000362142 91 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RNU6-1181P-201ENST00000384191 106 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.455-201ENST00000384230 98 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 MIR591-201ENST00000385290 95 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RNU2-23P-201ENST00000410545 195 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 COTL1P1-201ENST00000422309 375 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 BX276092.3-201ENST00000424182 230 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AL356867.1-201ENST00000429623 299 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 HMGB3P30-201ENST00000457863 606 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 snoU13.4-201ENST00000458916 104 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 U8.20-201ENST00000459445 131 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AC006445.2-201ENST00000510061 472 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RNU6-264P-201ENST00000517134 104 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 TRAV32-201ENST00000553993 340 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AC004817.2-201ENST00000561794 651 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AC092447.9-201ENST00000603395 144 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AC138627.2-201ENST00000624202 601 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 Z69720.2-201ENST00000624755 279 ntBASIC2.77□□□□□ -1.97
LMO3Q8TAP4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LMO3Q8TAP4 AC091812.1-201ENST00000432235 1948 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC005592.1-201ENST00000566527 1640 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AL353746.1-201ENST00000566293 6881 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC062016.1-201ENST00000355719 319 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.47-201ENST00000362697 108 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.153-201ENST00000363615 91 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.193-201ENST00000363979 102 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.485-201ENST00000384395 102 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 MIR1290-201ENST00000408735 78 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 RNU6-325P-201ENST00000411132 105 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 MRPS18CP6-201ENST00000423587 223 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 RPL27AP8-201ENST00000424277 446 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 MTCYBP10-201ENST00000424905 650 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 SNORA59A-201ENST00000459326 152 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC018437.1-201ENST00000492214 406 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC022447.4-201ENST00000504053 364 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 RNU6-475P-201ENST00000516073 104 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 ZNF192P1-203ENST00000565888 810 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC109446.1-201ENST00000566172 220 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC113195.1-201ENST00000579952 141 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC011471.1-201ENST00000585766 187 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 VN1R107P-201ENST00000601784 209 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AL121917.1-203ENST00000605534 577 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 SNORD58B-201ENST00000607313 66 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AP002826.1-201ENST00000608835 315 ntBASIC2.76□□□□□ -1.97
LMO3Q8TAP4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO3Q8TAP4 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 RNU6-859P-201ENST00000362728 107 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.401-201ENST00000383965 117 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 MIR34A-201ENST00000385130 110 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 RNU2-33P-201ENST00000410344 192 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 SNORD56-201ENST00000413522 71 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AC096644.2-201ENST00000429278 159 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AC099799.1-201ENST00000439809 192 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 DAP3P1-201ENST00000441522 278 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 CECR9-201ENST00000453421 199 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 RPL17P19-201ENST00000489069 552 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AC025755.1-201ENST00000521306 278 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 CKS1BP7-201ENST00000522230 235 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 7SK.7-201ENST00000603504 247 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 AP000787.2-201ENST00000604432 568 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 PRR13P7-201ENST00000605538 430 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 U4.1-201ENST00000620349 87 ntBASIC2.75□□□□□ -1.97
LMO3Q8TAP4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO3Q8TAP4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms