Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USP38Q8NB14 AK3P2-201ENST00000507976 429 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 RNU6-1314P-201ENST00000517139 104 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.97□□□□□ -1.93
USP38Q8NB14 AC104576.1-201ENST00000524225 88 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 AC010186.2-204ENST00000537668 439 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 MIR4765-201ENST00000585007 77 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 AC060780.3-201ENST00000589464 80 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.97□□□□□ -1.93
USP38Q8NB14 AC006504.8-201ENST00000621046 635 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 MIR3529-201ENST00000637713 78 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP38Q8NB14 AC121333.1-201ENST00000567488 2709 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.96□□□□□ -1.94
USP38Q8NB14 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.96□□□□□ -1.94
USP38Q8NB14 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
USP38Q8NB14 Y_RNA.40-201ENST00000362645 93 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 RNU6-428P-201ENST00000362942 107 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 VTRNA1-1-201ENST00000363120 99 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 Y_RNA.100-201ENST00000363141 102 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 SNORD113-7-201ENST00000363762 77 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 Y_RNA.530-201ENST00000384587 101 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 RNU6-1106P-201ENST00000390845 107 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AL079342.1-201ENST00000401460 267 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AL356776.1-201ENST00000406574 447 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 MIR1287-201ENST00000408492 90 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 USP9YP20-201ENST00000419224 558 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 NDUFA5P4-201ENST00000436704 385 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.96□□□□□ -1.94
USP38Q8NB14 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.96□□□□□ -1.94
USP38Q8NB14 RPL36AP48-201ENST00000485521 314 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.96□□□□□ -1.94
USP38Q8NB14 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AC103996.1-201ENST00000555468 102 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.96□□□□□ -1.94
USP38Q8NB14 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.96□□□□□ -1.94
USP38Q8NB14 AL121917.1-203ENST00000605534 577 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 AC046143.2-201ENST00000609789 160 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 U4.7-201ENST00000638126 106 ntBASIC2.96□□□□□ -1.94
USP38Q8NB14 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP38Q8NB14 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP38Q8NB14 Y_RNA.160-201ENST00000363677 92 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 RNU6-1083P-201ENST00000384022 107 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 MIR627-201ENST00000384979 97 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AL356057.3-201ENST00000402607 340 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 RNU6-1140P-201ENST00000410517 106 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 RNU4-53P-201ENST00000410828 140 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.95□□□□□ -1.94
USP38Q8NB14 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.95□□□□□ -1.94
USP38Q8NB14 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.95□□□□□ -1.94
USP38Q8NB14 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.95□□□□□ -1.94
USP38Q8NB14 AC112771.1-201ENST00000463581 102 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 RPL23AP70-201ENST00000483361 460 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 RNA5SP282-201ENST00000516355 108 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AC109479.2-201ENST00000517842 174 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 COX6CP5-201ENST00000527162 228 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 CR383656.8-201ENST00000549046 145 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 MIR4801-201ENST00000582704 82 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AC018638.8-201ENST00000588755 281 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AC021646.1-201ENST00000605469 484 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 AL136221.1-201ENST00000621449 509 ntBASIC2.95□□□□□ -1.94
USP38Q8NB14 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.95□□□□□ -1.94
USP38Q8NB14 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
USP38Q8NB14 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
USP38Q8NB14 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.94□□□□□ -1.94
USP38Q8NB14 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
USP38Q8NB14 RNU6-254P-201ENST00000363377 107 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 RNU6-214P-201ENST00000384130 107 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 RNA5SP425-201ENST00000410336 112 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 RNU6-1245P-201ENST00000411130 106 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AC074117.2-201ENST00000417130 397 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.94□□□□□ -1.94
USP38Q8NB14 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.94□□□□□ -1.94
USP38Q8NB14 MTCYBP40-201ENST00000509390 1135 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 FAM206BP-201ENST00000510179 541 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 RNA5SP445-201ENST00000515889 115 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AP005597.4-201ENST00000526762 229 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 PSMA3P-201ENST00000555485 635 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AC103810.1-201ENST00000579873 453 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 uc_338.14-201ENST00000613162 166 ntBASIC2.94□□□□□ -1.94
USP38Q8NB14 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.94□□□□□ -1.94
USP38Q8NB14 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.94□□□□□ -1.94
USP38Q8NB14 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.94□□□□□ -1.94
USP38Q8NB14 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.93□□□□□ -1.94
USP38Q8NB14 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AL359854.1-201ENST00000614203 1594 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.93□□□□□ -1.94
USP38Q8NB14 Y_RNA.414-201ENST00000384011 101 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 RNU6-843P-201ENST00000384454 104 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 RNU6-293P-201ENST00000411259 106 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.93□□□□□ -1.94
USP38Q8NB14 AL513185.2-201ENST00000425543 193 ntBASIC2.93□□□□□ -1.94
USP38Q8NB14 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.93□□□□□ -1.94
USP38Q8NB14 AC112220.1-201ENST00000434628 355 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms