Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RPL30P11-203ENST00000598995 310 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RMST_7.1-201ENST00000621935 268 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 Z69720.2-201ENST00000624755 279 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MIR3529-201ENST00000637713 78 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC027514.1-201ENST00000588561 1603 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.9-201ENST00000362354 101 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.38-201ENST00000362617 102 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-78P-201ENST00000362897 107 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-527P-201ENST00000363425 104 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 RNU4-20P-201ENST00000365601 151 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.399-201ENST00000383955 105 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA48.3-201ENST00000391081 134 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 MIR548F1-201ENST00000408667 84 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC006026.2-201ENST00000457376 180 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 PMCHL2-203ENST00000457791 237 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC087884.1-201ENST00000469738 328 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AP001025.1-201ENST00000486139 332 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC018437.1-201ENST00000492214 406 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 RPL23AP49-201ENST00000492925 468 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC097462.2-201ENST00000504623 481 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC008526.1-201ENST00000509149 338 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA25.17-201ENST00000517184 124 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 MTND1P35-201ENST00000526739 508 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AL157687.1-201ENST00000554853 619 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AL118558.2-201ENST00000556294 238 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC136619.2-201ENST00000563361 631 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 LARP7P3-201ENST00000579888 337 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC073410.2-201ENST00000603240 332 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AL713866.2-201ENST00000603579 219 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC092747.3-201ENST00000603769 301 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC123912.5-201ENST00000605470 343 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-91P-201ENST00000607774 107 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC096772.1-201ENST00000609146 564 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 MIR1321-201ENST00000637766 79 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC068137.3-201ENST00000639191 341 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 AC073869.6-201ENST00000640656 341 ntBASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71LQ8N9Z2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.378-201ENST00000365652 113 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.402-201ENST00000383972 102 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA67.4-201ENST00000384688 142 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 MIR186-201ENST00000384988 86 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 RNU2-63P-201ENST00000410792 194 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 HMGB3P2-201ENST00000411913 584 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC074117.2-201ENST00000417130 397 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AL139413.1-201ENST00000421309 217 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 COTL1P1-201ENST00000422309 375 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC107083.1-201ENST00000439643 279 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 USP9YP8-201ENST00000441913 500 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 CENPUP1-201ENST00000526649 1202 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC023050.3-201ENST00000541142 333 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC090115.3-201ENST00000553218 849 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 PSMA3P-201ENST00000555485 635 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 ZNF519P2-201ENST00000557032 169 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 MTCO3P23-201ENST00000561363 289 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC010525.2-201ENST00000590920 195 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 VN1R80P-201ENST00000597126 338 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC022202.1-201ENST00000613515 211 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 AC090517.3-201ENST00000625170 141 ntBASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 FER-210ENST00000628534 558 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC71LQ8N9Z2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CCDC71LQ8N9Z2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CCDC71LQ8N9Z2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC71LQ8N9Z2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC71LQ8N9Z2 OR4G1P-203ENST00000641984 1631 ntBASIC1.84□□□□□ -2.12
CCDC71LQ8N9Z2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-212P-201ENST00000362642 104 ntBASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 RNU1-57P-201ENST00000384491 166 ntBASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 SNORD115-47-201ENST00000391226 86 ntBASIC1.83□□□□□ -2.12
CCDC71LQ8N9Z2 RNU6-192P-201ENST00000391253 100 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms