Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USPL1Q5W0Q7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 RNU6-137P-201ENST00000363680 108 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 RNU6-338P-201ENST00000383888 105 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 SNORD63-201ENST00000384262 68 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 Y_RNA.539-201ENST00000384635 107 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 Y_RNA.555-201ENST00000384673 110 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 MIR215-201ENST00000384858 110 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 Z82188.1-201ENST00000436709 154 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 AC243964.1-201ENST00000441814 261 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 RNU2-58P-201ENST00000516403 183 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 DEFB108E-201ENST00000524692 240 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 MIR5680-201ENST00000577577 84 ntBASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.45□□□□□ -1.7
USPL1Q5W0Q7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 ZNF826P-207ENST00000622273 1910 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 Y_RNA.29-201ENST00000362570 113 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 Y_RNA.143-201ENST00000363520 106 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 RNU6-898P-201ENST00000365627 104 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 RNU1-139P-201ENST00000391307 165 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 AL079342.1-201ENST00000401460 267 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 RNA5SP129-201ENST00000410276 118 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 RPL23AP95-201ENST00000426806 265 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 AL445305.1-201ENST00000432577 575 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 MTND5P15-201ENST00000434246 349 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 Z75741.1-201ENST00000446793 314 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 U8.22-201ENST00000459141 133 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 GZMAP1-201ENST00000503054 631 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 RPL23AP94-201ENST00000512518 302 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 SNORA81.3-201ENST00000517283 198 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 MRPS36P4-201ENST00000534436 298 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 NACAP3-201ENST00000552100 481 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 MIR4659A-201ENST00000580269 81 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 MIR4325-201ENST00000583049 90 ntBASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
USPL1Q5W0Q7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 U3.26-201ENST00000391236 204 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AL603910.2-201ENST00000407268 136 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 RN7SKP53-201ENST00000411337 315 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AC016700.2-201ENST00000446011 156 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AC097462.2-201ENST00000504623 481 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 RNU6-1114P-201ENST00000516022 107 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AP006245.1-201ENST00000522549 120 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 AC244205.2-202ENST00000635781 342 ntBASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USPL1Q5W0Q7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 Y_RNA.462-201ENST00000384268 102 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 UBA52P6-201ENST00000399822 382 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 RNU4-61P-201ENST00000411243 107 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 EIF1P2-201ENST00000428233 350 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AC125238.1-201ENST00000448842 249 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AL136097.1-201ENST00000456945 913 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AC084357.1-201ENST00000473404 255 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 RPL30P1-201ENST00000488676 339 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 EIF4BP1-201ENST00000554881 351 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AP003355.3-201ENST00000623465 114 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 AC097372.5-201ENST00000623665 376 ntBASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.42□□□□□ -1.7
USPL1Q5W0Q7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USPL1Q5W0Q7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms