Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ELOCP29-201ENST00000588193 334 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN1BQ07699 AC092747.3-201ENST00000603769 301 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC018889.1-201ENST00000605372 397 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC103591.3-201ENST00000608684 209 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN1BQ07699 AC006386.2-201ENST00000624491 75 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC012005.1-201ENST00000624575 75 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN1BQ07699 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN1BQ07699 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN1BQ07699 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN1BQ07699 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SCN1BQ07699 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 RNU4-15P-201ENST00000362613 141 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 RNU6-1159P-201ENST00000362933 107 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 RNU4-20P-201ENST00000365601 151 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 POLHP1-201ENST00000411806 470 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.16□□□□□ -2.06
SCN1BQ07699 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 CBX3P6-201ENST00000430257 527 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 ARL5AP4-201ENST00000430731 512 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 DNAJC19P4-201ENST00000440115 345 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 GPM6BP3-201ENST00000442797 145 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN1BQ07699 SNORD109B-201ENST00000458961 67 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 SNORD109A-201ENST00000459128 67 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AC107401.1-201ENST00000503426 685 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC022447.4-201ENST00000504053 364 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN1BQ07699 RN7SKP132-201ENST00000516001 208 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN1BQ07699 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AC078814.3-201ENST00000553036 491 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 TRAV32-201ENST00000553993 340 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN1BQ07699 MIR3136-201ENST00000583498 78 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC078899.2-201ENST00000595282 212 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN1BQ07699 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SCN1BQ07699 AC073534.2-201ENST00000620377 381 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AL359880.1-201ENST00000621879 266 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 AC124864.2-201ENST00000624736 186 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
SCN1BQ07699 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN1BQ07699 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
SCN1BQ07699 AP000560.1-201ENST00000624150 1937 ntBASIC2.15□□□□□ -2.06
SCN1BQ07699 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN1BQ07699 RNU6-859P-201ENST00000362728 107 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 Y_RNA.378-201ENST00000365652 113 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 Y_RNA.481-201ENST00000384373 102 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 MIR196B-201ENST00000384852 84 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 MIR9-1-201ENST00000385198 89 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 SNORA46.1-201ENST00000391069 153 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 CALM2P3-201ENST00000400429 449 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 RNU2-52P-201ENST00000410680 190 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN1BQ07699 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN1BQ07699 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN1BQ07699 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 IPO7P1-201ENST00000442031 636 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN1BQ07699 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 PTP4A1P4-201ENST00000512479 322 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 RPL39P5-202ENST00000512505 151 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN1BQ07699 MIR449C-201ENST00000516047 92 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 AC024909.2-201ENST00000553035 286 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 AC009314.1-201ENST00000603871 304 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 AC135507.2-201ENST00000612443 309 ntBASIC2.15□□□□□ -2.07
SCN1BQ07699 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SCN1BQ07699 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
SCN1BQ07699 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN1BQ07699 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 RNU6-38P-201ENST00000384085 107 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 SNORA40.19-201ENST00000390846 128 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AL360182.1-201ENST00000397433 468 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 SNORA11.1-201ENST00000408133 129 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 RN7SKP61-201ENST00000410642 295 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN1BQ07699 AC096920.1-201ENST00000423991 241 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN1BQ07699 RNU6-333P-201ENST00000459117 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms