Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MTCYBP40-201ENST00000509390 1135 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 RNU6-390P-201ENST00000516259 103 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA4P78363 SNORA77B-201ENST00000578179 125 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AF038458.1-201ENST00000588406 262 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 MIR515-2-201ENST00000384883 83 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 MIR515-1-201ENST00000384884 83 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 MIR329-1-201ENST00000385028 80 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AL161935.2-201ENST00000414627 60 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 ELOCP30-201ENST00000447108 299 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 RPL26P26-201ENST00000480251 434 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 RNU6-758P-201ENST00000516292 89 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA4P78363 AP001189.2-201ENST00000527320 189 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.43□□□□□ -2.34
ABCA4P78363 AC002400.1-201ENST00000569310 726 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 MIR4802-201ENST00000581881 80 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.43□□□□□ -2.34
ABCA4P78363 AC112220.3-201ENST00000605502 502 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 MIR6718-201ENST00000616153 80 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AL590240.4-201ENST00000616908 390 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.43□□□□□ -2.34
ABCA4P78363 AC107982.1-201ENST00000507171 1300 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
ABCA4P78363 Y_RNA.234-201ENST00000364409 97 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 SNORA48.1-201ENST00000390879 135 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AL117342.1-201ENST00000404861 406 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA4P78363 AL353752.1-201ENST00000454946 260 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 RPL31P3-201ENST00000458430 332 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA4P78363 MTND2P33-201ENST00000506452 1031 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AC005741.1-201ENST00000511094 432 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 RN7SKP88-201ENST00000516847 250 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.43□□□□□ -2.34
ABCA4P78363 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.43□□□□□ -2.34
ABCA4P78363 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 AC084824.5-201ENST00000612009 413 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 7SK.8-201ENST00000612110 250 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 7SK.11-201ENST00000615477 250 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 7SK.13-201ENST00000622040 250 ntBASIC0.43□□□□□ -2.34
ABCA4P78363 SNORD114-19-201ENST00000363072 75 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-1019P-201ENST00000364424 107 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 SNORD114-15-201ENST00000364687 72 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-439P-201ENST00000384188 106 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-43P-201ENST00000384302 107 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-952P-201ENST00000391164 108 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AL359634.1-202ENST00000404721 284 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU2-64P-201ENST00000411315 191 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AL022718.1-201ENST00000412004 84 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA4P78363 MTCO1P3-201ENST00000429327 192 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AC104563.1-201ENST00000476147 376 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU2-53P-201ENST00000516257 147 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNVU1-2-201ENST00000516326 135 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AC090142.3-201ENST00000519012 385 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 IGLVI-20-201ENST00000519296 130 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA4P78363 MIR5094-201ENST00000578766 85 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 AC099654.9-201ENST00000637055 678 ntBASIC0.42□□□□□ -2.34
ABCA4P78363 RNU6-438P-201ENST00000365561 103 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA4P78363 SNRPGP12-201ENST00000449481 213 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 HMGN1P10-201ENST00000474557 553 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 HMGB1P30-201ENST00000492455 606 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA4P78363 AC008945.2-201ENST00000606056 604 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 RNU6-655P-201ENST00000362858 107 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 Y_RNA.170-201ENST00000363746 110 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 SNORA72.2-201ENST00000365028 127 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 RNU6-910P-201ENST00000390844 107 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 RPL23AP32-201ENST00000395315 459 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA4P78363 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
ABCA4P78363 AC099677.2-201ENST00000436385 175 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA4P78363 RNA5SP437-201ENST00000517249 129 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.41□□□□□ -2.34
ABCA4P78363 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA4P78363 MIR3169-201ENST00000578032 83 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 MIR4305-201ENST00000583252 102 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AC253576.2-201ENST00000618815 580 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AL157770.1-201ENST00000623049 439 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 AC008163.1-202ENST00000636004 2889 ntBASIC0.41□□□□□ -2.34
ABCA4P78363 RNU6-112P-201ENST00000363599 104 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 RNA5SP368-201ENST00000364298 116 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
ABCA4P78363 AC104651.1-201ENST00000427559 735 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 USP9YP22-201ENST00000438971 294 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.4□□□□□ -2.34
ABCA4P78363 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.4□□□□□ -2.34
ABCA4P78363 AC134050.1-201ENST00000495088 933 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 SNORA31.4-201ENST00000516049 129 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 RNU6-551P-201ENST00000516661 103 ntBASIC0.4□□□□□ -2.34
ABCA4P78363 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.4□□□□□ -2.34
ABCA4P78363 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms