Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORA31.5-201ENST00000516190 133 ntBASIC4.14□□□□□ -1.75
CHMP4BP1P59074 SNORA74D-201ENST00000516404 141 ntBASIC4.14□□□□□ -1.75
CHMP4BP1P59074 MIR4474-201ENST00000579189 78 ntBASIC4.14□□□□□ -1.75
CHMP4BP1P59074 RNVU1-4-201ENST00000612985 164 ntBASIC4.14□□□□□ -1.75
CHMP4BP1P59074 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4BP1P59074 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4BP1P59074 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4BP1P59074 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4BP1P59074 RNU6-222P-201ENST00000362438 107 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 Y_RNA.27-201ENST00000362540 103 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RNU1-76P-201ENST00000362903 159 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RNU6-898P-201ENST00000365627 104 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RNU2-25P-201ENST00000411041 191 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RNU2-14P-201ENST00000411053 191 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 ATP5A1P2-201ENST00000412323 255 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 BPY2DP-201ENST00000422208 265 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AL031659.1-201ENST00000447075 539 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RPL23AP62-201ENST00000463396 453 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4BP1P59074 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RN7SKP209-201ENST00000516888 304 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 RNU6-1231P-201ENST00000517185 103 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC104581.2-201ENST00000572227 430 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 MIR7975-201ENST00000619350 68 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC241585.2-209ENST00000638217 143 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC010680.1-201ENST00000590024 3590 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 AC007256.1-201ENST00000392253 2765 ntBASIC4.13□□□□□ -1.75
CHMP4BP1P59074 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4BP1P59074 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AL365361.1-201ENST00000566942 3481 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 SNORD9-201ENST00000362566 104 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AL358453.1-201ENST00000422522 250 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 SDAD1P3-201ENST00000427380 333 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 RPL30P1-201ENST00000488676 339 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 SNORA43.2-201ENST00000516652 128 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AP002770.2-201ENST00000543613 532 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AC022080.3-201ENST00000544433 482 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AL442163.3-201ENST00000554110 156 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 AL365434.2-201ENST00000607979 234 ntBASIC4.12□□□□□ -1.75
CHMP4BP1P59074 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CHMP4BP1P59074 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 SNORA20.1-201ENST00000364790 130 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RNU6-198P-201ENST00000384258 104 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RNA5SP252-201ENST00000391131 119 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 U3.37-201ENST00000408528 213 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RN7SKP210-201ENST00000459176 261 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RNU7-87P-201ENST00000459343 62 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AC025518.1-201ENST00000479856 347 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 HMGB1P35-201ENST00000503360 598 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 IGKV2-23-201ENST00000518729 323 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 HMGN2P15-201ENST00000585707 270 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AL451007.1-201ENST00000595491 289 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 RNU1-30P-201ENST00000606575 163 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 MIR8058-201ENST00000615737 89 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 MIR6134-201ENST00000617606 109 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHMP4BP1P59074 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
CHMP4BP1P59074 Y_RNA.16-201ENST00000362421 102 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 Y_RNA.237-201ENST00000364439 102 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHMP4BP1P59074 RNA5SP424-201ENST00000390988 115 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 PTMAP5-201ENST00000393073 333 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 RNU2-20P-201ENST00000410425 191 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 AP000275.1-201ENST00000411943 390 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.1□□□□□ -1.75
CHMP4BP1P59074 AP000907.1-201ENST00000428428 510 ntBASIC4.1□□□□□ -1.75
CHMP4BP1P59074 HMGN2P20-201ENST00000437531 273 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms