Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.16□□□□□ -1.9
TM4SF4P48230 RNU6-329P-201ENST00000459618 107 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AC130509.1-201ENST00000464158 433 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AC092436.3-201ENST00000511788 257 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF4P48230 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.16□□□□□ -1.9
TM4SF4P48230 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
TM4SF4P48230 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.16□□□□□ -1.9
TM4SF4P48230 AL121579.1-201ENST00000555129 305 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AC026464.5-201ENST00000562497 722 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 MIR4790-201ENST00000577799 79 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AC064836.2-201ENST00000609491 462 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TM4SF4P48230 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
TM4SF4P48230 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TM4SF4P48230 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.15□□□□□ -1.9
TM4SF4P48230 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TM4SF4P48230 MTND4P23-201ENST00000447723 1363 ntBASIC3.15□□□□□ -1.9
TM4SF4P48230 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RNU6-845P-201ENST00000362578 103 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RNU6-1010P-201ENST00000362757 107 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 SNORA72.1-201ENST00000363485 129 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 SNORD116-11-201ENST00000383882 92 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RNU6-622P-201ENST00000384272 103 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RNU6-790P-201ENST00000384479 105 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF4P48230 RPS29P13-201ENST00000402041 169 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AL591806.2-201ENST00000433122 173 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AL645568.3-201ENST00000433683 316 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.15□□□□□ -1.91
TM4SF4P48230 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.15□□□□□ -1.91
TM4SF4P48230 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF4P48230 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 RPL9P9-202ENST00000466501 579 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 SNRPGP7-201ENST00000469016 106 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 Y_RNA.676-201ENST00000516393 96 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 SCARNA3-201ENST00000517097 143 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AC109329.1-201ENST00000518744 317 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AC079598.5-201ENST00000547460 117 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.15□□□□□ -1.91
TM4SF4P48230 MIR3672-201ENST00000584290 82 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AL670379.2-201ENST00000604983 252 ntBASIC3.15□□□□□ -1.91
TM4SF4P48230 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.15□□□□□ -1.91
TM4SF4P48230 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF4P48230 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF4P48230 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF4P48230 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.15□□□□□ -1.91
TM4SF4P48230 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF4P48230 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 Y_RNA.166-201ENST00000363730 102 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF4P48230 Y_RNA.390-201ENST00000383932 102 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 RNU6-1222P-201ENST00000384615 107 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 MIR627-201ENST00000384979 97 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 MIR764-201ENST00000390811 85 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 BTF3L4P2-201ENST00000392798 346 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 RNU4-53P-201ENST00000410828 140 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 RNU6-1148P-201ENST00000410992 104 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
TM4SF4P48230 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.14□□□□□ -1.91
TM4SF4P48230 RPL39P29-201ENST00000447779 157 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.14□□□□□ -1.91
TM4SF4P48230 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 AMD1P1-201ENST00000457220 922 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 RPL30P12-201ENST00000474666 353 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 SNORA25.11-201ENST00000515935 105 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.14□□□□□ -1.91
TM4SF4P48230 AC005046.1-201ENST00000608515 625 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 uc_338.15-201ENST00000615470 191 ntBASIC3.14□□□□□ -1.91
TM4SF4P48230 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF4P48230 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF4P48230 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF4P48230 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF4P48230 Y_RNA.135-201ENST00000363439 95 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU6-1180P-201ENST00000364935 107 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU1-57P-201ENST00000384491 166 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 MIR218-1-201ENST00000384999 110 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU2-23P-201ENST00000410545 195 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 AL030996.1-201ENST00000411430 235 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.13□□□□□ -1.91
TM4SF4P48230 RPS15AP7-201ENST00000439294 405 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.13□□□□□ -1.91
TM4SF4P48230 AC107399.1-201ENST00000451226 265 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.13□□□□□ -1.91
TM4SF4P48230 RPL23AP70-201ENST00000483361 460 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 AP001025.1-201ENST00000486139 332 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 Y_RNA.673-201ENST00000516306 88 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU6-566P-201ENST00000516790 107 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU7-30P-201ENST00000516835 62 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNU1-54P-201ENST00000517181 120 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 RNA5SP454-201ENST00000517231 127 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 TRAV32-201ENST00000553993 340 ntBASIC3.13□□□□□ -1.91
TM4SF4P48230 SCOCP1-201ENST00000554676 349 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms