Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNA5SP118-201ENST00000410385 109 ntBASIC2.59□□□□□ -1.99
HADHAP40939 RNU6-1140P-201ENST00000410517 106 ntBASIC2.59□□□□□ -1.99
HADHAP40939 RNU6-293P-201ENST00000411259 106 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.59□□□□□ -1.99
HADHAP40939 USP9YP20-201ENST00000419224 558 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
HADHAP40939 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.59□□□□□ -1.99
HADHAP40939 AC087884.1-201ENST00000469738 328 ntBASIC2.59□□□□□ -1.99
HADHAP40939 RPL30P1-201ENST00000488676 339 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.59□□□□□ -1.99
HADHAP40939 AK3P2-201ENST00000507976 429 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.59□□□□□ -1.99
HADHAP40939 SNORA48.11-201ENST00000517015 89 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.59□□□□□ -1.99
HADHAP40939 AC068790.6-201ENST00000602558 258 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AL713866.2-201ENST00000603579 219 ntBASIC2.59□□□□□ -1.99
HADHAP40939 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.59□□□□□ -1.99
HADHAP40939 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
HADHAP40939 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.59□□□□□ -1.99
HADHAP40939 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HADHAP40939 AP000560.1-201ENST00000624150 1937 ntBASIC2.59□□□□□ -1.99
HADHAP40939 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HADHAP40939 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
HADHAP40939 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
HADHAP40939 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HADHAP40939 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
HADHAP40939 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.59□□□□□ -2
HADHAP40939 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
HADHAP40939 RNU6-522P-201ENST00000364497 107 ntBASIC2.58□□□□□ -2
HADHAP40939 RNU6-1141P-201ENST00000364520 107 ntBASIC2.58□□□□□ -2
HADHAP40939 RNU6-827P-201ENST00000365553 106 ntBASIC2.58□□□□□ -2
HADHAP40939 MIR544A-201ENST00000384855 91 ntBASIC2.58□□□□□ -2
HADHAP40939 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
HADHAP40939 RNU6-192P-201ENST00000391253 100 ntBASIC2.58□□□□□ -2
HADHAP40939 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HADHAP40939 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
HADHAP40939 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HADHAP40939 AC243964.1-201ENST00000441814 261 ntBASIC2.58□□□□□ -2
HADHAP40939 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.58□□□□□ -2
HADHAP40939 AC082651.2-201ENST00000496833 166 ntBASIC2.58□□□□□ -2
HADHAP40939 TRBVA-201ENST00000498804 316 ntBASIC2.58□□□□□ -2
HADHAP40939 AC022447.4-201ENST00000504053 364 ntBASIC2.58□□□□□ -2
HADHAP40939 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
HADHAP40939 RNU6-1038P-201ENST00000516516 104 ntBASIC2.58□□□□□ -2
HADHAP40939 RN7SKP256-201ENST00000517201 314 ntBASIC2.58□□□□□ -2
HADHAP40939 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.58□□□□□ -2
HADHAP40939 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.58□□□□□ -2
HADHAP40939 AC243972.3-201ENST00000539655 198 ntBASIC2.58□□□□□ -2
HADHAP40939 IMMP1LP2-201ENST00000552954 492 ntBASIC2.58□□□□□ -2
HADHAP40939 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.58□□□□□ -2
HADHAP40939 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
HADHAP40939 AC010525.2-201ENST00000590920 195 ntBASIC2.58□□□□□ -2
HADHAP40939 AL355297.2-201ENST00000604792 129 ntBASIC2.58□□□□□ -2
HADHAP40939 AL670379.2-201ENST00000604983 252 ntBASIC2.58□□□□□ -2
HADHAP40939 AC122108.2-201ENST00000611946 526 ntBASIC2.58□□□□□ -2
HADHAP40939 AC098679.4-201ENST00000624241 654 ntBASIC2.58□□□□□ -2
HADHAP40939 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
HADHAP40939 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HADHAP40939 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.58□□□□□ -2
HADHAP40939 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HADHAP40939 RNU6-428P-201ENST00000362942 107 ntBASIC2.57□□□□□ -2
HADHAP40939 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
HADHAP40939 RNU4-12P-201ENST00000365233 139 ntBASIC2.57□□□□□ -2
HADHAP40939 Y_RNA.554-201ENST00000384672 102 ntBASIC2.57□□□□□ -2
HADHAP40939 AL445529.1-201ENST00000398713 389 ntBASIC2.57□□□□□ -2
HADHAP40939 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
HADHAP40939 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.57□□□□□ -2
HADHAP40939 AL359672.1-201ENST00000442302 409 ntBASIC2.57□□□□□ -2
HADHAP40939 RNU6-1037P-201ENST00000459571 107 ntBASIC2.57□□□□□ -2
HADHAP40939 RPL30P12-201ENST00000474666 353 ntBASIC2.57□□□□□ -2
HADHAP40939 RNU6-323P-201ENST00000521915 107 ntBASIC2.57□□□□□ -2
HADHAP40939 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.57□□□□□ -2
HADHAP40939 MTND1P35-201ENST00000526739 508 ntBASIC2.57□□□□□ -2
HADHAP40939 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.57□□□□□ -2
HADHAP40939 MIR5692C1-201ENST00000585309 91 ntBASIC2.57□□□□□ -2
HADHAP40939 AC080078.2-201ENST00000603766 501 ntBASIC2.57□□□□□ -2
HADHAP40939 AL357078.3-201ENST00000607528 618 ntBASIC2.57□□□□□ -2
HADHAP40939 AC090517.2-201ENST00000614966 680 ntBASIC2.57□□□□□ -2
HADHAP40939 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.57□□□□□ -2
HADHAP40939 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.57□□□□□ -2
HADHAP40939 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HADHAP40939 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HADHAP40939 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HADHAP40939 Y_RNA.38-201ENST00000362617 102 ntBASIC2.56□□□□□ -2
HADHAP40939 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
HADHAP40939 Y_RNA.167-201ENST00000363735 109 ntBASIC2.56□□□□□ -2
HADHAP40939 Y_RNA.256-201ENST00000364594 104 ntBASIC2.56□□□□□ -2
HADHAP40939 RNU6-877P-201ENST00000383868 107 ntBASIC2.56□□□□□ -2
HADHAP40939 MIR561-201ENST00000385216 97 ntBASIC2.56□□□□□ -2
HADHAP40939 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
HADHAP40939 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.56□□□□□ -2
HADHAP40939 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.56□□□□□ -2
HADHAP40939 AL139413.1-201ENST00000421309 217 ntBASIC2.56□□□□□ -2
HADHAP40939 SNAP23P1-201ENST00000433229 246 ntBASIC2.56□□□□□ -2
HADHAP40939 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.56□□□□□ -2
HADHAP40939 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.56□□□□□ -2
HADHAP40939 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
HADHAP40939 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.56□□□□□ -2
HADHAP40939 RNU6-586P-201ENST00000517265 104 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms