Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLIP1P30622 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.06□□□□□ -2.42
CLIP1P30622 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.06□□□□□ -2.42
CLIP1P30622 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.06□□□□□ -2.42
CLIP1P30622 TRAV32-201ENST00000553993 340 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AC068620.3-201ENST00000602749 560 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
CLIP1P30622 AC242852.1-201ENST00000612151 96 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AC013476.2-201ENST00000614456 459 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AC123767.1-202ENST00000620407 817 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AC244015.1-201ENST00000622301 99 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 OR5AK4P-201ENST00000635912 903 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 RNU4-73P-201ENST00000363164 141 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 MIR604-201ENST00000384880 94 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 SNORD12-201ENST00000391002 90 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 RNU6-233P-201ENST00000410845 141 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 CCDC58P2-201ENST00000417131 366 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 ELOCP14-201ENST00000428070 331 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 AC010153.1-201ENST00000432862 727 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 ELOCP7-201ENST00000439968 331 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.07□□□□□ -2.42
CLIP1P30622 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.07□□□□□ -2.42
CLIP1P30622 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.07□□□□□ -2.42
CLIP1P30622 AC113410.1-201ENST00000505029 247 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 SNORA31.4-201ENST00000516049 129 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 IGJP1-201ENST00000522682 475 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 AC104417.1-201ENST00000523974 751 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.07□□□□□ -2.42
CLIP1P30622 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.07□□□□□ -2.42
CLIP1P30622 AL590229.1-201ENST00000603497 542 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 AC034229.4-201ENST00000607861 441 ntBASIC-0.07□□□□□ -2.42
CLIP1P30622 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 DHFRP6-201ENST00000401776 268 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 SNORD99-201ENST00000408612 74 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 RNA5SP111-201ENST00000411386 101 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 MTND1P28-201ENST00000435623 950 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 RPL37P21-201ENST00000435890 276 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.08□□□□□ -2.42
CLIP1P30622 AP003049.1-201ENST00000529418 457 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC-0.08□□□□□ -2.42
CLIP1P30622 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.08□□□□□ -2.42
CLIP1P30622 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CLIP1P30622 MIR4431-201ENST00000579990 94 ntBASIC-0.08□□□□□ -2.42
CLIP1P30622 ENSAP3-201ENST00000312710 333 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CLIP1P30622 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 RNU6-878P-201ENST00000384578 110 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 MIR520A-201ENST00000384862 85 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 SNORD89-201ENST00000390981 114 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 AF228730.1-201ENST00000397972 663 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 RAB28P5-201ENST00000427490 651 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.09□□□□□ -2.42
CLIP1P30622 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.09□□□□□ -2.42
CLIP1P30622 RPS27AP8-201ENST00000452665 445 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 AC010587.2-201ENST00000511727 448 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.09□□□□□ -2.42
CLIP1P30622 AL136520.1-202ENST00000555494 763 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.09□□□□□ -2.42
CLIP1P30622 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.09□□□□□ -2.42
CLIP1P30622 MIR103A1-201ENST00000362165 78 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 MIR101-1-201ENST00000362265 75 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 RNA5SP264-201ENST00000363115 107 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 RNA5SP259-201ENST00000365541 109 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.1□□□□□ -2.43
CLIP1P30622 RPL22P18-201ENST00000417197 377 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AL451054.2-201ENST00000420896 202 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 FAM204CP-201ENST00000424489 642 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AC092685.1-201ENST00000447960 1243 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC105758.1-201ENST00000506038 399 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC097473.1-201ENST00000508142 408 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.1□□□□□ -2.43
CLIP1P30622 SNORA14.1-201ENST00000516113 141 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 RNU2-53P-201ENST00000516257 147 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 RNU6-840P-201ENST00000517275 65 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.1□□□□□ -2.43
CLIP1P30622 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.43
CLIP1P30622 AL020997.3-201ENST00000602843 359 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC107952.2-201ENST00000606048 486 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC098614.4-201ENST00000607601 462 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AL451064.1-201ENST00000607718 471 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 MIR1248-201ENST00000629190 106 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AL590396.2-201ENST00000636511 1041 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 AC100810.6-201ENST00000638068 285 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 MTND5P16-201ENST00000460269 1703 ntBASIC-0.1□□□□□ -2.43
CLIP1P30622 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
CLIP1P30622 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CLIP1P30622 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 RNY1P8-201ENST00000383970 114 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 MIR214-201ENST00000385214 110 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CLIP1P30622 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.11□□□□□ -2.43
CLIP1P30622 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms