Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL078605.1-201ENST00000603529 500 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AC126177.8-201ENST00000618339 1015 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A5P29400 AC099654.9-201ENST00000637055 678 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AC092125.1-201ENST00000562568 1995 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 RNU6-942P-201ENST00000363002 107 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 Y_RNA.303-201ENST00000364998 94 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 MIR29B2-201ENST00000385055 81 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
COL4A5P29400 SNORA40.2-201ENST00000390847 128 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 CBX3P9-201ENST00000402326 552 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 MIR1284-201ENST00000408337 120 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 RNU4-22P-201ENST00000411058 166 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 BTF3L4P1-201ENST00000413813 468 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 ELOCP17-201ENST00000414751 326 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A5P29400 ELOCP9-201ENST00000418624 239 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A5P29400 MTND1P3-201ENST00000484956 952 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 HMGN1P13-201ENST00000505795 138 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.84□□□□□ -2.27
COL4A5P29400 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A5P29400 AC021171.1-201ENST00000603137 706 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.84□□□□□ -2.27
COL4A5P29400 MTND5P42-201ENST00000637720 498 ntBASIC0.84□□□□□ -2.27
COL4A5P29400 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A5P29400 AC073544.1-201ENST00000600110 1595 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 CBX3P1-201ENST00000325243 554 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 SNORA25.8-201ENST00000364831 128 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 RNU6-298P-201ENST00000390888 96 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 BTF3L4P2-201ENST00000392798 346 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.84□□□□□ -2.28
COL4A5P29400 OR9R1P-201ENST00000412200 877 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AL365338.1-201ENST00000422282 858 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A5P29400 MTND2P33-201ENST00000506452 1031 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 RNU6-1315P-201ENST00000517187 99 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.84□□□□□ -2.28
COL4A5P29400 AP000763.2-201ENST00000540641 163 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A5P29400 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A5P29400 AC093249.1-201ENST00000567049 203 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AC137800.2-201ENST00000574375 120 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AL358072.1-201ENST00000604156 575 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AC022893.3-201ENST00000607665 437 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AC245297.2-201ENST00000610119 565 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AC004908.3-201ENST00000610248 625 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 AC087588.2-201ENST00000617667 426 ntBASIC0.84□□□□□ -2.28
COL4A5P29400 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A5P29400 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNY4P24-201ENST00000362735 96 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNU6-487P-201ENST00000365430 104 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNU6-395P-201ENST00000365662 106 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNU6-413P-201ENST00000384115 107 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNU6-843P-201ENST00000384454 104 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 SNORD116-20-201ENST00000384529 92 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.83□□□□□ -2.28
COL4A5P29400 RNA5SP501-201ENST00000410990 112 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A5P29400 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A5P29400 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AL139824.2-201ENST00000458731 1095 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 snoU13.9-201ENST00000458927 103 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 RNU1-98P-201ENST00000458992 160 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC011005.2-201ENST00000487324 359 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC016550.1-201ENST00000505348 785 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A5P29400 MTCYBP40-201ENST00000509390 1135 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC116353.3-201ENST00000511215 249 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.83□□□□□ -2.28
COL4A5P29400 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.83□□□□□ -2.28
COL4A5P29400 AC092325.1-201ENST00000566449 554 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.83□□□□□ -2.28
COL4A5P29400 BNIP3P27-201ENST00000599991 412 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AL355802.3-201ENST00000607571 545 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC072039.2-201ENST00000608883 439 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AL355816.2-201ENST00000610049 647 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 AC130454.1-201ENST00000622948 401 ntBASIC0.83□□□□□ -2.28
COL4A5P29400 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COL4A5P29400 RNU6-414P-201ENST00000363705 104 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 RNU6-777P-201ENST00000364265 104 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 RNU6-723P-201ENST00000383973 107 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 RNU6-955P-201ENST00000410497 104 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
COL4A5P29400 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 RPL30P1-201ENST00000488676 339 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.82□□□□□ -2.28
COL4A5P29400 VN1R82P-201ENST00000601481 356 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 CLIC4P2-201ENST00000601934 717 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AL353778.1-201ENST00000603149 408 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms