Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH3P22223 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
CDH3P22223 RNU6-858P-201ENST00000362436 107 ntBASIC2.44□□□□□ -2.02
CDH3P22223 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH3P22223 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH3P22223 SNORD116-20-201ENST00000384529 92 ntBASIC2.44□□□□□ -2.02
CDH3P22223 MIR147B-201ENST00000390185 80 ntBASIC2.44□□□□□ -2.02
CDH3P22223 RNU6-1328P-201ENST00000410938 106 ntBASIC2.44□□□□□ -2.02
CDH3P22223 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH3P22223 RNU7-138P-201ENST00000459479 64 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AP001324.2-201ENST00000461163 319 ntBASIC2.44□□□□□ -2.02
CDH3P22223 RPL7P43-201ENST00000478876 753 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.44□□□□□ -2.02
CDH3P22223 AC023141.11-201ENST00000508864 202 ntBASIC2.44□□□□□ -2.02
CDH3P22223 FAM206BP-201ENST00000510179 541 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AC010486.1-201ENST00000511793 424 ntBASIC2.44□□□□□ -2.02
CDH3P22223 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AF235103.2-201ENST00000525753 346 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AP005597.4-201ENST00000526762 229 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
CDH3P22223 MIR4435-1-201ENST00000582552 80 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH3P22223 AC243829.7-201ENST00000633081 225 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AC100810.6-201ENST00000638068 285 ntBASIC2.44□□□□□ -2.02
CDH3P22223 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH3P22223 AC080128.1-201ENST00000474389 1917 ntBASIC2.44□□□□□ -2.02
CDH3P22223 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH3P22223 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH3P22223 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH3P22223 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH3P22223 RNU6-1083P-201ENST00000384022 107 ntBASIC2.43□□□□□ -2.02
CDH3P22223 SNORD73A-201ENST00000386062 65 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AL133475.1-201ENST00000404414 305 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH3P22223 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.43□□□□□ -2.02
CDH3P22223 MTND1P23-201ENST00000416931 372 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AL117339.3-201ENST00000418733 162 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AL139413.1-201ENST00000421309 217 ntBASIC2.43□□□□□ -2.02
CDH3P22223 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH3P22223 AC013470.1-201ENST00000453438 462 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AC007547.1-201ENST00000462177 490 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AP001025.1-201ENST00000486139 332 ntBASIC2.43□□□□□ -2.02
CDH3P22223 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH3P22223 SNORA31.23-201ENST00000517219 133 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.43□□□□□ -2.02
CDH3P22223 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
CDH3P22223 RNU6-323P-201ENST00000521915 107 ntBASIC2.43□□□□□ -2.02
CDH3P22223 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
CDH3P22223 COPS8P3-201ENST00000526024 482 ntBASIC2.43□□□□□ -2.02
CDH3P22223 AL357078.3-201ENST00000607528 618 ntBASIC2.43□□□□□ -2.02
CDH3P22223 uc_338.14-201ENST00000613162 166 ntBASIC2.43□□□□□ -2.02
CDH3P22223 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CDH3P22223 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
CDH3P22223 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH3P22223 RBBP8P1-201ENST00000449447 1844 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH3P22223 RNU6-428P-201ENST00000362942 107 ntBASIC2.42□□□□□ -2.02
CDH3P22223 Y_RNA.100-201ENST00000363141 102 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RNU6-254P-201ENST00000363377 107 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RNU6-843P-201ENST00000384454 104 ntBASIC2.42□□□□□ -2.02
CDH3P22223 AL162578.1-201ENST00000406202 378 ntBASIC2.42□□□□□ -2.02
CDH3P22223 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH3P22223 AL513185.2-201ENST00000425543 193 ntBASIC2.42□□□□□ -2.02
CDH3P22223 NDUFA5P4-201ENST00000436704 385 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
CDH3P22223 IPO7P1-201ENST00000442031 636 ntBASIC2.42□□□□□ -2.02
CDH3P22223 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH3P22223 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH3P22223 RNU5B-3P-201ENST00000516601 115 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RNU6-1314P-201ENST00000517139 104 ntBASIC2.42□□□□□ -2.02
CDH3P22223 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH3P22223 AP000763.2-201ENST00000540641 163 ntBASIC2.42□□□□□ -2.02
CDH3P22223 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH3P22223 AC025423.5-201ENST00000550230 219 ntBASIC2.42□□□□□ -2.02
CDH3P22223 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
CDH3P22223 AL136221.1-201ENST00000621449 509 ntBASIC2.42□□□□□ -2.02
CDH3P22223 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
CDH3P22223 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH3P22223 AL109809.4-201ENST00000603520 2185 ntBASIC2.42□□□□□ -2.02
CDH3P22223 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDH3P22223 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH3P22223 Y_RNA.86-201ENST00000363020 111 ntBASIC2.41□□□□□ -2.02
CDH3P22223 RNU6-1252P-201ENST00000363054 104 ntBASIC2.41□□□□□ -2.02
CDH3P22223 SNORA6-201ENST00000384033 151 ntBASIC2.41□□□□□ -2.02
CDH3P22223 Y_RNA.530-201ENST00000384587 101 ntBASIC2.41□□□□□ -2.02
CDH3P22223 RNU6-220P-201ENST00000390919 107 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AL356776.1-201ENST00000406574 447 ntBASIC2.41□□□□□ -2.02
CDH3P22223 RNU6-1140P-201ENST00000410517 106 ntBASIC2.41□□□□□ -2.02
CDH3P22223 RNA5SP508-201ENST00000411327 119 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.41□□□□□ -2.02
CDH3P22223 AC074117.2-201ENST00000417130 397 ntBASIC2.41□□□□□ -2.02
CDH3P22223 AL365400.1-201ENST00000431854 640 ntBASIC2.41□□□□□ -2.02
CDH3P22223 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH3P22223 AL031274.1-201ENST00000450334 232 ntBASIC2.41□□□□□ -2.02
CDH3P22223 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH3P22223 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH3P22223 AC006026.2-201ENST00000457376 180 ntBASIC2.41□□□□□ -2.02
CDH3P22223 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH3P22223 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH3P22223 AC109479.2-201ENST00000517842 174 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 229.8 ms