Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFAP04085 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.12□□□□□ -1.75
PDGFAP04085 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PDGFAP04085 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 MIR331-201ENST00000362302 94 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 Y_RNA.170-201ENST00000363746 110 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 RNA5SP283-201ENST00000365604 119 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 RNY1P5-201ENST00000383890 115 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 RN7SKP51-201ENST00000410781 304 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFAP04085 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 RNY3P16-201ENST00000516338 101 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 SNORA67.7-201ENST00000516664 135 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 RNA5SP309-201ENST00000516670 106 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 IGLV3-26-201ENST00000520756 302 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 MIR3145-201ENST00000580727 82 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 AC113403.1-201ENST00000604910 193 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 AC034229.5-201ENST00000624258 185 ntBASIC4.11□□□□□ -1.75
PDGFAP04085 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PDGFAP04085 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDGFAP04085 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFAP04085 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFAP04085 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDGFAP04085 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.1□□□□□ -1.75
PDGFAP04085 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 RNU6-529P-201ENST00000363383 104 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 RNU6-211P-201ENST00000384047 107 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 AC009963.1-201ENST00000417265 157 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 OOSP1P1-201ENST00000423265 274 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFAP04085 RN7SL542P-201ENST00000467147 294 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 AC023632.4-201ENST00000517783 191 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 MRPS18CP4-201ENST00000535821 231 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 MIR5692C2-201ENST00000577959 77 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFAP04085 AC069200.1-201ENST00000609511 323 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 FAM27D1-201ENST00000612308 341 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 PCGEM1.1-201ENST00000613431 131 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 AC006133.1-201ENST00000617106 264 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PDGFAP04085 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFAP04085 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFAP04085 AC010300.1-201ENST00000600671 5134 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
PDGFAP04085 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFAP04085 CPHL1P-201ENST00000461341 3407 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFAP04085 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFAP04085 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFAP04085 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFAP04085 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFAP04085 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFAP04085 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
PDGFAP04085 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFAP04085 RNU6-1264P-201ENST00000383891 107 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 MTCO2P33-201ENST00000402100 465 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 RNA5SP201-201ENST00000410316 124 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 RNU6-1199P-201ENST00000411249 104 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFAP04085 RPL23AP52-201ENST00000439311 478 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFAP04085 MIR4308-201ENST00000580634 81 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 DEFB117-201ENST00000602356 141 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 AL365265.1-201ENST00000621045 234 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 snoU18.1-201ENST00000629629 71 ntBASIC4.09□□□□□ -1.75
PDGFAP04085 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFAP04085 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.76
PDGFAP04085 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
PDGFAP04085 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.09□□□□□ -1.76
PDGFAP04085 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.76
PDGFAP04085 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFAP04085 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFAP04085 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFAP04085 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFAP04085 RNU6-750P-201ENST00000390946 107 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 RNU6-628P-201ENST00000410675 107 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFAP04085 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 RPS29P26-201ENST00000477483 171 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.08□□□□□ -1.76
PDGFAP04085 RNU6-107P-201ENST00000516643 102 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFAP04085 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 EIF4A1P12-201ENST00000551910 141 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFAP04085 RN7SL600P-201ENST00000581811 299 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 MIR3158-1-201ENST00000583596 81 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 AC011471.1-201ENST00000585766 187 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 AC005562.2-201ENST00000618264 111 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms