Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TGFAP01135 SNORD70.1-201ENST00000391007 85 ntBASIC1.92□□□□□ -2.1
TGFAP01135 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
TGFAP01135 MIR1294-201ENST00000408503 142 ntBASIC1.92□□□□□ -2.1
TGFAP01135 RNA5SP181-201ENST00000410246 98 ntBASIC1.92□□□□□ -2.1
TGFAP01135 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.92□□□□□ -2.1
TGFAP01135 MTND1P23-201ENST00000416931 372 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.92□□□□□ -2.1
TGFAP01135 EIF4EP2-201ENST00000422816 654 ntBASIC1.92□□□□□ -2.1
TGFAP01135 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
TGFAP01135 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
TGFAP01135 MTND4P32-201ENST00000437189 1237 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.92□□□□□ -2.1
TGFAP01135 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.92□□□□□ -2.1
TGFAP01135 RNU6-430P-201ENST00000517078 107 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AC069113.1-201ENST00000517763 267 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AP005639.2-201ENST00000527592 928 ntBASIC1.92□□□□□ -2.1
TGFAP01135 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.92□□□□□ -2.1
TGFAP01135 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.92□□□□□ -2.1
TGFAP01135 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.92□□□□□ -2.1
TGFAP01135 SUB1P2-201ENST00000556401 297 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AC040904.1-201ENST00000590850 223 ntBASIC1.92□□□□□ -2.1
TGFAP01135 RSL24D1P11-201ENST00000591045 491 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.92□□□□□ -2.1
TGFAP01135 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
TGFAP01135 CYP2C61P-201ENST00000604072 290 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AC121247.2-201ENST00000604776 136 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AL034555.1-201ENST00000604816 211 ntBASIC1.92□□□□□ -2.1
TGFAP01135 AC025754.2-201ENST00000606491 432 ntBASIC1.92□□□□□ -2.1
TGFAP01135 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TGFAP01135 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
TGFAP01135 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 MTND5P6-201ENST00000422338 1798 ntBASIC1.91□□□□□ -2.1
TGFAP01135 Y_RNA.399-201ENST00000383955 105 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RNU6-142P-201ENST00000384019 107 ntBASIC1.91□□□□□ -2.1
TGFAP01135 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RPS29P13-201ENST00000402041 169 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RN7SKP142-201ENST00000411236 328 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RNU6-293P-201ENST00000411259 106 ntBASIC1.91□□□□□ -2.1
TGFAP01135 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
TGFAP01135 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
TGFAP01135 MTCO2P11-201ENST00000431069 680 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RPS12P2-201ENST00000439728 269 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 SCARNA18-201ENST00000459004 134 ntBASIC1.91□□□□□ -2.1
TGFAP01135 RNU6-333P-201ENST00000459117 107 ntBASIC1.91□□□□□ -2.1
TGFAP01135 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.91□□□□□ -2.1
TGFAP01135 MTND3P5-201ENST00000512798 333 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 SNRPGP18-201ENST00000553000 214 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.91□□□□□ -2.1
TGFAP01135 BNIP3P25-201ENST00000596023 559 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 AC063943.3-201ENST00000615562 356 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
TGFAP01135 AC005609.4-201ENST00000625071 447 ntBASIC1.91□□□□□ -2.1
TGFAP01135 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.91□□□□□ -2.1
TGFAP01135 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.91□□□□□ -2.1
TGFAP01135 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TGFAP01135 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TGFAP01135 AC233981.2-201ENST00000611524 1614 ntBASIC1.91□□□□□ -2.1
TGFAP01135 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
TGFAP01135 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
TGFAP01135 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TGFAP01135 MTND4P14-201ENST00000435799 1354 ntBASIC1.9□□□□□ -2.11
TGFAP01135 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 RNU6-1164P-201ENST00000364428 107 ntBASIC1.9□□□□□ -2.11
TGFAP01135 RNU4-56P-201ENST00000364700 142 ntBASIC1.9□□□□□ -2.11
TGFAP01135 RNU6-336P-201ENST00000364891 107 ntBASIC1.9□□□□□ -2.11
TGFAP01135 SNORA16.2-201ENST00000390991 127 ntBASIC1.9□□□□□ -2.11
TGFAP01135 RNU11-3P-201ENST00000391111 133 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.9□□□□□ -2.11
TGFAP01135 MTATP6P18-201ENST00000417994 673 ntBASIC1.9□□□□□ -2.11
TGFAP01135 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
TGFAP01135 UBE2V1P4-201ENST00000425374 344 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 SNRPFP3-201ENST00000457792 225 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.9□□□□□ -2.11
TGFAP01135 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC009646.1-201ENST00000510455 318 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 SNORA25.17-201ENST00000517184 124 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
TGFAP01135 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.9□□□□□ -2.11
TGFAP01135 TRAV32-201ENST00000553993 340 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 AC087752.4-201ENST00000605911 462 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AL022345.1-201ENST00000607292 135 ntBASIC1.9□□□□□ -2.11
TGFAP01135 AL137847.3-201ENST00000611521 109 ntBASIC1.9□□□□□ -2.11
TGFAP01135 RMST_6.1-201ENST00000611980 203 ntBASIC1.9□□□□□ -2.11
TGFAP01135 SNORD98-201ENST00000636377 67 ntBASIC1.9□□□□□ -2.11
TGFAP01135 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms