Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
C1RP00736 HMGB1P35-201ENST00000503360 598 ntBASIC3.33□□□□□ -1.88
C1RP00736 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.33□□□□□ -1.88
C1RP00736 RNU1-86P-201ENST00000516108 154 ntBASIC3.33□□□□□ -1.88
C1RP00736 SNORA40.14-201ENST00000516543 86 ntBASIC3.33□□□□□ -1.88
C1RP00736 RNU1-107P-201ENST00000516617 154 ntBASIC3.33□□□□□ -1.88
C1RP00736 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
C1RP00736 RNU6-111P-201ENST00000517179 105 ntBASIC3.33□□□□□ -1.88
C1RP00736 TRAV32-201ENST00000553993 340 ntBASIC3.33□□□□□ -1.88
C1RP00736 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.33□□□□□ -1.88
C1RP00736 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.33□□□□□ -1.88
C1RP00736 AC012433.1-201ENST00000588916 398 ntBASIC3.33□□□□□ -1.88
C1RP00736 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
C1RP00736 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
C1RP00736 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.33□□□□□ -1.88
C1RP00736 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.33□□□□□ -1.88
C1RP00736 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C1RP00736 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C1RP00736 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C1RP00736 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
C1RP00736 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.33□□□□□ -1.88
C1RP00736 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C1RP00736 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C1RP00736 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.32□□□□□ -1.88
C1RP00736 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
C1RP00736 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C1RP00736 RNY1P16-201ENST00000363063 111 ntBASIC3.32□□□□□ -1.88
C1RP00736 RNU6-395P-201ENST00000365662 106 ntBASIC3.32□□□□□ -1.88
C1RP00736 Y_RNA.577-201ENST00000384794 101 ntBASIC3.32□□□□□ -1.88
C1RP00736 RNU6-607P-201ENST00000411283 108 ntBASIC3.32□□□□□ -1.88
C1RP00736 AL353621.1-201ENST00000418219 243 ntBASIC3.32□□□□□ -1.88
C1RP00736 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.32□□□□□ -1.88
C1RP00736 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.32□□□□□ -1.88
C1RP00736 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
C1RP00736 UBE2DNL-203ENST00000474922 222 ntBASIC3.32□□□□□ -1.88
C1RP00736 AC098869.1-201ENST00000481627 292 ntBASIC3.32□□□□□ -1.88
C1RP00736 AC008716.1-201ENST00000511084 513 ntBASIC3.32□□□□□ -1.88
C1RP00736 Y_RNA.687-201ENST00000516558 91 ntBASIC3.32□□□□□ -1.88
C1RP00736 RNU6-897P-201ENST00000517135 105 ntBASIC3.32□□□□□ -1.88
C1RP00736 RNA5SP165-201ENST00000517142 115 ntBASIC3.32□□□□□ -1.88
C1RP00736 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
C1RP00736 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
C1RP00736 HMGB1P14-201ENST00000557424 591 ntBASIC3.32□□□□□ -1.88
C1RP00736 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.32□□□□□ -1.88
C1RP00736 LRRC37A5P-203ENST00000580181 585 ntBASIC3.32□□□□□ -1.88
C1RP00736 UBL5P2-201ENST00000583788 219 ntBASIC3.32□□□□□ -1.88
C1RP00736 SDR42E1P4-201ENST00000620894 481 ntBASIC3.32□□□□□ -1.88
C1RP00736 AC006386.2-201ENST00000624491 75 ntBASIC3.32□□□□□ -1.88
C1RP00736 AC012005.1-201ENST00000624575 75 ntBASIC3.32□□□□□ -1.88
C1RP00736 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
C1RP00736 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C1RP00736 AL353746.1-201ENST00000566293 6881 ntBASIC3.32□□□□□ -1.88
C1RP00736 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C1RP00736 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C1RP00736 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.31□□□□□ -1.88
C1RP00736 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C1RP00736 MTND5P6-201ENST00000422338 1798 ntBASIC3.31□□□□□ -1.88
C1RP00736 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
C1RP00736 Y_RNA.276-201ENST00000364732 109 ntBASIC3.31□□□□□ -1.88
C1RP00736 SNORA20.1-201ENST00000364790 130 ntBASIC3.31□□□□□ -1.88
C1RP00736 Y_RNA.480-201ENST00000384364 102 ntBASIC3.31□□□□□ -1.88
C1RP00736 RNU6-1093P-201ENST00000391194 107 ntBASIC3.31□□□□□ -1.88
C1RP00736 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.31□□□□□ -1.88
C1RP00736 CST9LP2-201ENST00000437612 320 ntBASIC3.31□□□□□ -1.88
C1RP00736 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.31□□□□□ -1.88
C1RP00736 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.31□□□□□ -1.88
C1RP00736 RPL39P38-201ENST00000467018 153 ntBASIC3.31□□□□□ -1.88
C1RP00736 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
C1RP00736 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
C1RP00736 RNU6-1282P-201ENST00000516735 96 ntBASIC3.31□□□□□ -1.88
C1RP00736 OR1M4P-201ENST00000589199 287 ntBASIC3.31□□□□□ -1.88
C1RP00736 AC073410.2-201ENST00000603240 332 ntBASIC3.31□□□□□ -1.88
C1RP00736 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.31□□□□□ -1.88
C1RP00736 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
C1RP00736 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
C1RP00736 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C1RP00736 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
C1RP00736 AL157777.2-201ENST00000258070 137 ntBASIC3.3□□□□□ -1.88
C1RP00736 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
C1RP00736 AL159169.1-201ENST00000421119 127 ntBASIC3.3□□□□□ -1.88
C1RP00736 MYL8P-204ENST00000431574 518 ntBASIC3.3□□□□□ -1.88
C1RP00736 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
C1RP00736 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
C1RP00736 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.3□□□□□ -1.88
C1RP00736 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
C1RP00736 LINC01399-202ENST00000458450 244 ntBASIC3.3□□□□□ -1.88
C1RP00736 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
C1RP00736 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.3□□□□□ -1.88
C1RP00736 SYF2P1-201ENST00000550658 413 ntBASIC3.3□□□□□ -1.88
C1RP00736 ELOCP29-201ENST00000588193 334 ntBASIC3.3□□□□□ -1.88
C1RP00736 AL033523.1-201ENST00000605153 153 ntBASIC3.3□□□□□ -1.88
C1RP00736 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.3□□□□□ -1.88
C1RP00736 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.3□□□□□ -1.88
C1RP00736 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.3□□□□□ -1.88
C1RP00736 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
C1RP00736 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
C1RP00736 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
C1RP00736 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
C1RP00736 AL359693.1-201ENST00000614959 2407 ntBASIC3.29□□□□□ -1.88
C1RP00736 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms