Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL121594.1-201ENST00000475906 575 ntBASIC2.56□□□□□ -2
NKX2-2O95096 HMGN1P12-201ENST00000499125 195 ntBASIC2.56□□□□□ -2
NKX2-2O95096 AC114801.2-201ENST00000503825 781 ntBASIC2.56□□□□□ -2
NKX2-2O95096 RNU6-273P-201ENST00000516937 96 ntBASIC2.56□□□□□ -2
NKX2-2O95096 AC115990.1-201ENST00000526957 301 ntBASIC2.56□□□□□ -2
NKX2-2O95096 AP005639.2-201ENST00000527592 928 ntBASIC2.56□□□□□ -2
NKX2-2O95096 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
NKX2-2O95096 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.56□□□□□ -2
NKX2-2O95096 AL133215.3-201ENST00000609801 448 ntBASIC2.56□□□□□ -2
NKX2-2O95096 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.56□□□□□ -2
NKX2-2O95096 AL133216.2-202ENST00000634512 349 ntBASIC2.56□□□□□ -2
NKX2-2O95096 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
NKX2-2O95096 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
NKX2-2O95096 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
NKX2-2O95096 AP000560.1-201ENST00000624150 1937 ntBASIC2.56□□□□□ -2
NKX2-2O95096 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
NKX2-2O95096 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NKX2-2O95096 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
NKX2-2O95096 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NKX2-2O95096 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NKX2-2O95096 RNU6-212P-201ENST00000362642 104 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RNU6-655P-201ENST00000362858 107 ntBASIC2.55□□□□□ -2
NKX2-2O95096 SNORA72.1-201ENST00000363485 129 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.55□□□□□ -2
NKX2-2O95096 MIR128-1-201ENST00000384921 82 ntBASIC2.55□□□□□ -2
NKX2-2O95096 SNORA48.2-201ENST00000390926 124 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RN7SKP61-201ENST00000410642 295 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
NKX2-2O95096 PDCL2P1-201ENST00000419302 352 ntBASIC2.55□□□□□ -2
NKX2-2O95096 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.55□□□□□ -2
NKX2-2O95096 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.55□□□□□ -2
NKX2-2O95096 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.55□□□□□ -2
NKX2-2O95096 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.55□□□□□ -2
NKX2-2O95096 RPL30P1-201ENST00000488676 339 ntBASIC2.55□□□□□ -2
NKX2-2O95096 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
NKX2-2O95096 RNA5SP385-201ENST00000515947 110 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RNU2-53P-201ENST00000516257 147 ntBASIC2.55□□□□□ -2
NKX2-2O95096 SNORA74D-201ENST00000516404 141 ntBASIC2.55□□□□□ -2
NKX2-2O95096 RNU7-30P-201ENST00000516835 62 ntBASIC2.55□□□□□ -2
NKX2-2O95096 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.55□□□□□ -2
NKX2-2O95096 MIR3200-201ENST00000580767 85 ntBASIC2.55□□□□□ -2
NKX2-2O95096 MIR548S-201ENST00000581352 82 ntBASIC2.55□□□□□ -2
NKX2-2O95096 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
NKX2-2O95096 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
NKX2-2O95096 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NKX2-2O95096 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
NKX2-2O95096 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
NKX2-2O95096 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NKX2-2O95096 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NKX2-2O95096 SNORD62.1-201ENST00000362541 86 ntBASIC2.54□□□□□ -2
NKX2-2O95096 RNY3P14-201ENST00000384309 102 ntBASIC2.54□□□□□ -2
NKX2-2O95096 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.54□□□□□ -2
NKX2-2O95096 AL139396.1-201ENST00000421137 167 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AL133396.1-201ENST00000432048 687 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
NKX2-2O95096 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
NKX2-2O95096 AC103975.1-201ENST00000482506 483 ntBASIC2.54□□□□□ -2
NKX2-2O95096 MTND5P5-201ENST00000503764 376 ntBASIC2.54□□□□□ -2
NKX2-2O95096 PTP4A1P4-201ENST00000512479 322 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AP005902.1-201ENST00000521358 186 ntBASIC2.54□□□□□ -2
NKX2-2O95096 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.54□□□□□ -2
NKX2-2O95096 AL121579.1-201ENST00000555129 305 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.54□□□□□ -2
NKX2-2O95096 uc_338.5-201ENST00000611839 155 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AL355073.2-201ENST00000612106 557 ntBASIC2.54□□□□□ -2
NKX2-2O95096 AC005858.4-201ENST00000623191 700 ntBASIC2.54□□□□□ -2
NKX2-2O95096 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.54□□□□□ -2
NKX2-2O95096 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.54□□□□□ -2
NKX2-2O95096 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.54□□□□□ -2
NKX2-2O95096 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.53□□□□□ -2
NKX2-2O95096 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NKX2-2O95096 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
NKX2-2O95096 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
NKX2-2O95096 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.53□□□□□ -2
NKX2-2O95096 RNU6-933P-201ENST00000384424 107 ntBASIC2.53□□□□□ -2
NKX2-2O95096 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
NKX2-2O95096 SNORA26.3-201ENST00000391119 136 ntBASIC2.53□□□□□ -2
NKX2-2O95096 BTF3L4P2-201ENST00000392798 346 ntBASIC2.53□□□□□ -2
NKX2-2O95096 MIR548K-201ENST00000408406 116 ntBASIC2.53□□□□□ -2
NKX2-2O95096 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
NKX2-2O95096 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
NKX2-2O95096 AC078809.1-201ENST00000427601 140 ntBASIC2.53□□□□□ -2
NKX2-2O95096 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.53□□□□□ -2
NKX2-2O95096 AC112220.1-201ENST00000434628 355 ntBASIC2.53□□□□□ -2
NKX2-2O95096 DAP3P1-201ENST00000441522 278 ntBASIC2.53□□□□□ -2
NKX2-2O95096 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.53□□□□□ -2
NKX2-2O95096 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.53□□□□□ -2
NKX2-2O95096 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
NKX2-2O95096 RPS26P21-201ENST00000475397 348 ntBASIC2.53□□□□□ -2
NKX2-2O95096 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.53□□□□□ -2
NKX2-2O95096 Y_RNA.682-201ENST00000516457 100 ntBASIC2.53□□□□□ -2
NKX2-2O95096 HSPE1P20-201ENST00000538133 289 ntBASIC2.53□□□□□ -2
NKX2-2O95096 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.53□□□□□ -2
NKX2-2O95096 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NKX2-2O95096 AC005730.3-201ENST00000583067 366 ntBASIC2.53□□□□□ -2
NKX2-2O95096 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms