Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC092608.3-201ENST00000625017 386 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC005592.1-201ENST00000566527 1640 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 OR5T3-201ENST00000303059 1023 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC119751.3-201ENST00000399720 670 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL121978.1-201ENST00000402778 359 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.13□□□□□ -2.39
CACNA1AO00555 RPL36AP53-201ENST00000432891 316 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 NANOGP2-201ENST00000435391 727 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.13□□□□□ -2.39
CACNA1AO00555 SNRPEP9-201ENST00000436794 238 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC013828.1-201ENST00000481845 158 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 ACA59.2-201ENST00000517061 156 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC040926.1-201ENST00000530195 238 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 ZNF705CP-201ENST00000530515 889 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR3937-201ENST00000580135 106 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC068790.6-201ENST00000602558 258 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC004853.1-201ENST00000604902 698 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC092953.2-201ENST00000608000 699 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC016542.1-201ENST00000608259 493 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 Z82243.1-201ENST00000609432 473 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CACNA1AO00555 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CACNA1AO00555 MIR424-201ENST00000362227 98 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 Y_RNA.255-201ENST00000364581 97 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 RNU4-12P-201ENST00000365233 139 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 RNU6-217P-201ENST00000384164 104 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AL109755.1-201ENST00000401791 649 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CACNA1AO00555 AL392003.1-201ENST00000434394 243 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AL929288.2-201ENST00000446368 407 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 TRBVA-201ENST00000498804 316 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.12□□□□□ -2.39
CACNA1AO00555 SNORD19.2-201ENST00000516978 73 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 SNORA70.22-201ENST00000517160 124 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 AC004067.1-201ENST00000608733 700 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AL512506.2-201ENST00000624472 458 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 U2.21-201ENST00000637295 81 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC106858.1-201ENST00000637497 429 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CACNA1AO00555 ZNF849P-201ENST00000594711 1566 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC138393.1-203ENST00000327086 343 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CACNA1AO00555 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CACNA1AO00555 RNU6-1151P-201ENST00000384684 107 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CACNA1AO00555 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 AC244023.1-201ENST00000426884 112 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.12□□□□□ -2.39
CACNA1AO00555 RPL31P3-201ENST00000458430 332 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 RNU6-732P-201ENST00000516033 103 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 RNU6-581P-201ENST00000516214 105 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 SNORA31.22-201ENST00000517204 135 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.12□□□□□ -2.39
CACNA1AO00555 ROCK1P1-201ENST00000573767 549 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC242498.1-201ENST00000604134 111 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC024257.5-201ENST00000612739 531 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 U4atac.1-201ENST00000618345 95 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 AC243994.1-201ENST00000618627 109 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.12□□□□□ -2.39
CACNA1AO00555 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.12□□□□□ -2.39
CACNA1AO00555 MIR1262-201ENST00000408276 93 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 MIR1283-2-201ENST00000408621 87 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNU2-33P-201ENST00000410344 192 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNU2-47P-201ENST00000410649 186 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.11□□□□□ -2.39
CACNA1AO00555 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.11□□□□□ -2.39
CACNA1AO00555 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.11□□□□□ -2.39
CACNA1AO00555 MTND1P33-201ENST00000446251 917 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC002381.1-201ENST00000447049 280 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 MEMO1P3-201ENST00000459811 302 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RPL32P14-201ENST00000463196 378 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC018868.1-201ENST00000491307 315 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC010469.2-201ENST00000496412 480 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 COPS8P3-201ENST00000526024 482 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.11□□□□□ -2.39
CACNA1AO00555 AC090578.1-201ENST00000604955 591 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC024581.2-201ENST00000619986 252 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC009033.1-201ENST00000624279 431 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNA5SP327-201ENST00000362494 101 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 Y_RNA.124-201ENST00000363339 93 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNU5E-8P-201ENST00000363502 116 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNU6-741P-201ENST00000383889 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms