Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU6-336P-201ENST00000364891 107 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 RNU6-1289P-201ENST00000384431 106 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 SNORD20-201ENST00000384550 80 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 Y_RNA.569-201ENST00000384749 103 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 Y_RNA.623-201ENST00000411128 95 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 RPL23AP36-201ENST00000413895 458 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 MTCO1P39-201ENST00000426148 480 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 IFNA11P-201ENST00000446352 526 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 SSXP4-201ENST00000451349 245 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 ATP5F1P5-201ENST00000526403 760 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
RFXAPO00287 AC005476.1-201ENST00000554427 397 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.79□□□□□ -1.8
RFXAPO00287 MIR4496-201ENST00000635896 61 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
RFXAPO00287 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
RFXAPO00287 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFXAPO00287 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFXAPO00287 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFXAPO00287 AL109809.4-201ENST00000603520 2185 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFXAPO00287 AC009812.4-201ENST00000569134 1805 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RFXAPO00287 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.79□□□□□ -1.8
RFXAPO00287 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.78□□□□□ -1.8
RFXAPO00287 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.78□□□□□ -1.8
RFXAPO00287 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RFXAPO00287 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 MIR412-201ENST00000362142 91 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 RNU6-227P-201ENST00000362865 103 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 RNU6-1168P-201ENST00000390831 104 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
RFXAPO00287 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.78□□□□□ -1.8
RFXAPO00287 RPL26P26-201ENST00000480251 434 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.78□□□□□ -1.8
RFXAPO00287 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.78□□□□□ -1.8
RFXAPO00287 AC107918.3-201ENST00000533272 382 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 AC090877.1-201ENST00000561418 344 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 AP000787.2-201ENST00000604432 568 ntBASIC3.78□□□□□ -1.8
RFXAPO00287 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RFXAPO00287 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFXAPO00287 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.77□□□□□ -1.81
RFXAPO00287 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.77□□□□□ -1.81
RFXAPO00287 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RFXAPO00287 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFXAPO00287 AC100821.1-201ENST00000523153 2479 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 SNORA25.1-201ENST00000362326 128 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 Y_RNA.497-201ENST00000384447 98 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 RNU6-1035P-201ENST00000384477 107 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 MIR301A-201ENST00000385261 86 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 AL513331.1-201ENST00000411908 397 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 AL031659.1-201ENST00000447075 539 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 HSPE1P6-201ENST00000479457 291 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 RPL21P13-201ENST00000488305 481 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 AC139453.3-201ENST00000493276 369 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 RPL31P61-201ENST00000496160 376 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.77□□□□□ -1.81
RFXAPO00287 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.77□□□□□ -1.81
RFXAPO00287 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.77□□□□□ -1.81
RFXAPO00287 MIR2355-201ENST00000517199 87 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.77□□□□□ -1.81
RFXAPO00287 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.77□□□□□ -1.81
RFXAPO00287 MIR4423-201ENST00000580922 80 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 AC067852.4-201ENST00000590314 478 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 SNORD113-5-201ENST00000607261 78 ntBASIC3.77□□□□□ -1.81
RFXAPO00287 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFXAPO00287 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFXAPO00287 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFXAPO00287 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFXAPO00287 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFXAPO00287 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RFXAPO00287 RNU6-879P-201ENST00000364328 108 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 Y_RNA.441-201ENST00000384123 112 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 RNU6-417P-201ENST00000384712 107 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 Y_RNA.568-201ENST00000384742 113 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 MIR487A-201ENST00000385009 80 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 RNA5SP213-201ENST00000391031 106 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 RPS4XP3-201ENST00000398541 413 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.76□□□□□ -1.81
RFXAPO00287 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.76□□□□□ -1.81
RFXAPO00287 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.76□□□□□ -1.81
RFXAPO00287 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.76□□□□□ -1.81
RFXAPO00287 AC009296.1-201ENST00000443146 155 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.76□□□□□ -1.81
RFXAPO00287 SNORD2.1-201ENST00000458762 69 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AC087588.1-201ENST00000462203 316 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AC073901.1-201ENST00000462471 408 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AP000870.1-201ENST00000472927 406 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 BTF3L4P4-201ENST00000506381 449 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.76□□□□□ -1.81
RFXAPO00287 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.76□□□□□ -1.81
RFXAPO00287 RNU5F-8P-201ENST00000515941 111 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
RFXAPO00287 RNU7-110P-201ENST00000516891 62 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms