Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SNORA1.3-201ENST00000384676 136 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 RN7SKP53-201ENST00000411337 315 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 COX6CP10-201ENST00000416832 224 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 SETP5-201ENST00000437270 562 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 RN7SL293P-201ENST00000481765 281 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 RNU1-61P-201ENST00000516107 151 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 SNORD116-28-201ENST00000516123 91 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 CYCSP23-201ENST00000519781 313 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 MIR3609-201ENST00000582661 80 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 MIR3922-201ENST00000585192 84 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 AC072026.1-201ENST00000605023 201 ntBASIC4.68□□□□□ -1.66
USP17L3A6NCW0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L3A6NCW0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 UBE2WP1-201ENST00000362030 340 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.82-201ENST00000363000 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.92-201ENST00000363043 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.235-201ENST00000364412 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 RNA5SP72-201ENST00000364442 117 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.306-201ENST00000365015 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.312-201ENST00000365089 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.322-201ENST00000365151 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC138623.1-201ENST00000418060 216 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC005300.1-201ENST00000428401 373 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 FTH1P6-201ENST00000430768 320 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 HMGB1P37-201ENST00000439613 609 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.650-201ENST00000459002 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 RPL30P12-201ENST00000474666 353 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC025554.1-201ENST00000505641 188 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.683-201ENST00000516508 93 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.777-201ENST00000516982 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.771-201ENST00000598668 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 Y_RNA.789-201ENST00000622480 102 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC073346.2-201ENST00000624724 2058 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC002543.1-201ENST00000299783 1954 ntBASIC4.67□□□□□ -1.66
USP17L3A6NCW0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L3A6NCW0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 RNU6-682P-201ENST00000363843 106 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 SNORA19-201ENST00000384737 128 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 MIR491-201ENST00000384877 84 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AC019205.3-201ENST00000424573 156 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AC010095.1-201ENST00000443543 144 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AP000705.1-201ENST00000454567 350 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 RN7SKP18-201ENST00000516005 275 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 SNORA70.24-201ENST00000517233 118 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AC022695.1-201ENST00000522089 237 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 MIR4282-201ENST00000583613 67 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AC244505.7-201ENST00000599675 272 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AC010620.2-201ENST00000600135 313 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 AL590240.4-201ENST00000616908 390 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP17L3A6NCW0 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
USP17L3A6NCW0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 AL109809.4-201ENST00000603520 2185 ntBASIC4.65□□□□□ -1.66
USP17L3A6NCW0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 AC004944.1-201ENST00000517807 3059 ntBASIC4.65□□□□□ -1.66
USP17L3A6NCW0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.65□□□□□ -1.66
USP17L3A6NCW0 RNA5SP197-201ENST00000363357 119 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 SNORA72.2-201ENST00000365028 127 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 Y_RNA.418-201ENST00000384029 102 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 Y_RNA.446-201ENST00000384178 104 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 MIR199A2-201ENST00000385289 110 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 RPL23AP82-202ENST00000427528 469 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 AC005042.3-201ENST00000453230 174 ntBASIC4.65□□□□□ -1.67
USP17L3A6NCW0 Y_RNA.638-201ENST00000459374 113 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms