Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC092809.3-201ENST00000415453 231 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 EBAG9P1-201ENST00000418955 543 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC013262.1-201ENST00000426710 252 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AL139824.2-201ENST00000458731 1095 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC027338.1-201ENST00000514840 825 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU5A-4P-201ENST00000516588 111 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC026616.1-201ENST00000523157 525 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC008088.1-201ENST00000580993 280 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AC007792.1-201ENST00000623023 402 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 AL163152.1-201ENST00000642001 374 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 SMIM11P1-201ENST00000369586 178 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 RNU6-331P-201ENST00000384724 107 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 MIR1305-201ENST00000408300 86 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 MIR320C1-201ENST00000408566 88 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 RNA5SP390-201ENST00000410191 113 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AL590556.1-201ENST00000423231 483 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 SNX2P2-201ENST00000424553 323 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 TXNL1P1-201ENST00000429528 554 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 MTCO1P27-201ENST00000448269 226 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 snoU13.30-201ENST00000458951 104 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 RNU6-333P-201ENST00000459117 107 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 PSMC1P5-201ENST00000512850 177 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AC091163.3-201ENST00000518269 1144 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AC109446.2-201ENST00000567872 497 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AC005776.1-201ENST00000603164 290 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 BNIP3P10-201ENST00000605360 577 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AC124016.2-201ENST00000610058 665 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AL365204.3-201ENST00000612448 685 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AL158163.2-201ENST00000619110 700 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 AL159153.1-201ENST00000619688 317 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 OR4G3P-201ENST00000633500 913 ntBASIC0.57□□□□□ -2.32
TRAV27A0A087WT01 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 HSBP1P2-201ENST00000299671 229 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AL356776.1-201ENST00000406574 447 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 MTCYBP5-201ENST00000423752 1135 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AL591043.1-201ENST00000432461 424 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 FTH1P25-201ENST00000447665 469 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC093899.1-201ENST00000457984 376 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC145146.1-201ENST00000496370 254 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 SUMO2P18-201ENST00000518873 252 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 AC012467.1-201ENST00000607740 256 ntBASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV27A0A087WT01 MIR340-201ENST00000362125 95 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 MIR10A-201ENST00000385043 110 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 SNORA40.2-201ENST00000390847 128 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 SNORA12-201ENST00000391162 147 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 RAP1BP3-201ENST00000407180 549 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC099677.2-201ENST00000436385 175 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AL122001.1-201ENST00000457027 370 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC134050.1-201ENST00000495088 933 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 MTND2P33-201ENST00000506452 1031 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 RNU6-677P-201ENST00000516914 101 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 RNA5SP503-201ENST00000517047 117 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 CYCSP23-201ENST00000519781 313 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC069114.2-201ENST00000604699 304 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 MIR15A-201ENST00000607334 83 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC092574.1-201ENST00000609771 420 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC068647.2-201ENST00000637380 353 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 OR4G1P-203ENST00000641984 1631 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 AC010615.1-201ENST00000594254 1764 ntBASIC0.55□□□□□ -2.32
TRAV27A0A087WT01 SNORD56.1-201ENST00000362913 68 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 MIR19B1-201ENST00000384829 87 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 VPS26BP1-201ENST00000417155 755 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 ISCA1P6-201ENST00000427740 390 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 TIMM9P1-201ENST00000436122 256 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 LARP1BP3-201ENST00000437229 869 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 HMGN2P9-201ENST00000476875 229 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC119751.4-201ENST00000507498 357 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 Y_RNA.687-201ENST00000516558 91 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms