Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RNU1-75P-201ENST00000347264 129 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RNU6-1080P-201ENST00000383982 107 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 Y_RNA.432-201ENST00000384087 111 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RN7SKP101-201ENST00000411376 320 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AL590139.1-201ENST00000416267 400 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AC027124.2-201ENST00000428249 105 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RPL21P10-201ENST00000463521 490 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RPS29P2-201ENST00000479278 136 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 RNU6-1282P-201ENST00000516735 96 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 PRELID2P1-201ENST00000552837 301 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 AL160236.1-201ENST00000556317 195 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB3Q9Y5E6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 SNORA2.3-201ENST00000383920 135 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 SNORA51.10-201ENST00000384418 136 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 MIR518C-201ENST00000384822 101 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 RNU6-1197P-201ENST00000391183 107 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 NDUFS5P4-201ENST00000412983 318 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 RPS27AP10-201ENST00000496103 208 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 MIR5006-201ENST00000583027 110 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 AP003357.1-201ENST00000604497 148 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 AL137843.1-201ENST00000605078 385 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 PCGEM1.1-201ENST00000613431 131 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 AC025031.4-201ENST00000621248 3271 ntBASIC4.8□□□□□ -1.64
PCDHB3Q9Y5E6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 Y_RNA.163-201ENST00000363702 113 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RNA5SP496-201ENST00000391240 109 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RPS16P5-201ENST00000406501 404 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RNA5SP201-201ENST00000410316 124 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RNU2-55P-201ENST00000411146 174 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AC126124.2-201ENST00000413542 321 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 EDDM3CP-201ENST00000415977 425 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AL139281.1-201ENST00000422120 335 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 CYCSP40-201ENST00000575927 294 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 MIR4737-201ENST00000583979 81 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AL034555.1-201ENST00000604816 211 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RMST_8.1-201ENST00000610287 165 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 MIR7641-1-201ENST00000627518 61 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 AL356489.2-201ENST00000566968 3528 ntBASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB3Q9Y5E6 DHX9P1-201ENST00000436565 3076 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 Y_RNA.85-201ENST00000363014 111 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 SNORA51.5-201ENST00000384126 131 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AL135786.1-201ENST00000415892 214 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 CYCSP48-201ENST00000417124 323 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 EIF4HP2-201ENST00000424380 563 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RPL23AP1-201ENST00000428990 471 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms