Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 AC145350.1-201ENST00000567426 208 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 AL078605.1-201ENST00000603529 500 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 AC091304.6-201ENST00000619761 202 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 SCARNA4-202ENST00000625402 129 ntBASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXC10Q9NYD6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 RNU6-1097P-201ENST00000363586 107 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 RNU6-108P-201ENST00000365558 107 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 RNU6-622P-201ENST00000384272 103 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 CISD1P1-201ENST00000393907 327 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 Z82205.1-201ENST00000428456 297 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 MTCO3P5-201ENST00000433620 714 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 SNORD27.1-201ENST00000516319 72 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 PSMA3P-201ENST00000555485 635 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC012414.6-201ENST00000568241 401 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 Z94722.1-201ENST00000604328 474 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AL670379.4-201ENST00000605279 254 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AL121992.2-201ENST00000606262 256 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AL133173.2-201ENST00000614270 90 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC093648.1-201ENST00000623546 606 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 AC019226.2-201ENST00000625973 424 ntBASIC1.91□□□□□ -2.1
HOXC10Q9NYD6 MTND4P23-201ENST00000447723 1363 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RNU6-179P-201ENST00000363350 107 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 SNORA25B-201ENST00000365507 128 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RNU6-74P-201ENST00000384235 107 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RNU6-297P-201ENST00000384636 107 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 MT-TH-201ENST00000387441 69 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 MTND2P18-201ENST00000419962 1030 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC112771.1-201ENST00000463581 102 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AL163540.1-201ENST00000485382 386 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AP001025.1-201ENST00000486139 332 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RBBP4P6-201ENST00000508098 202 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC034114.1-201ENST00000520293 285 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC025678.1-201ENST00000567861 338 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC109446.2-201ENST00000567872 497 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 NIFKP6-201ENST00000598115 845 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AL713866.2-201ENST00000603579 219 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC098614.4-201ENST00000607601 462 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 RMST_7.1-201ENST00000621935 268 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 AC007494.3-201ENST00000624660 743 ntBASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HOXC10Q9NYD6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 SNORD114-19-201ENST00000363072 75 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 RNU6-529P-201ENST00000363383 104 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 SNORD115-7-201ENST00000365306 82 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 SNORA26.8-201ENST00000391306 124 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 RNA5SP390-201ENST00000410191 113 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 RNU6-321P-201ENST00000410912 106 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 PGBD4P6-201ENST00000421501 610 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 CALM1P1-201ENST00000442082 433 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC006026.2-201ENST00000457376 180 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 snoU13.14-201ENST00000459372 104 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 RNU6-410P-201ENST00000517006 107 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC135279.1-201ENST00000543493 504 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 MIR4285-201ENST00000581001 85 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AL158032.1-201ENST00000605401 106 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 AC021646.1-201ENST00000605469 484 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 RBBP8P1-201ENST00000449447 1844 ntBASIC1.89□□□□□ -2.11
HOXC10Q9NYD6 OR4G2P-201ENST00000328113 903 ntBASIC1.88□□□□□ -2.11
HOXC10Q9NYD6 MIR337-201ENST00000362281 93 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms