Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNU6-985P-201ENST00000410182 104 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RNU6-101P-201ENST00000410323 104 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC126124.2-201ENST00000413542 321 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL358453.1-201ENST00000422522 250 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RPL23AP67-201ENST00000465341 474 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RPL30P1-201ENST00000488676 339 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RNU7-175P-201ENST00000515915 61 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC105137.2-201ENST00000569073 466 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL020997.2-201ENST00000602607 184 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 MTND5P1-201ENST00000445440 1375 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6-1309P-201ENST00000363305 108 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU4-9P-201ENST00000364951 139 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 SNORA36A-201ENST00000384221 132 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6-622P-201ENST00000384272 103 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 EI24P2-201ENST00000397776 1076 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNA5SP293-201ENST00000410527 113 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC009296.1-201ENST00000443146 155 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AL136097.1-201ENST00000456945 913 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AP001324.2-201ENST00000461163 319 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RN7SL542P-201ENST00000467147 294 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RPS27P26-201ENST00000494583 239 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 CKS1BP7-201ENST00000522230 235 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC007458.1-201ENST00000542812 373 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC006557.5-201ENST00000603126 811 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC104695.3-201ENST00000604052 296 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC100812.1-201ENST00000607622 580 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 MIR7851-201ENST00000610611 160 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC087588.2-201ENST00000617667 426 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AC039056.2-201ENST00000622261 511 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 CR392039.5-201ENST00000623201 510 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 AL034408.1-202ENST00000636088 415 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RLIMQ9NVW2 MFSD8-233ENST00000641482 4860 ntBASIC3.13□□□□□ -1.91
RLIMQ9NVW2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RNU6-874P-201ENST00000362390 105 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.455-201ENST00000384230 98 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MIR32-201ENST00000384965 70 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MIR190B-201ENST00000401119 79 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RNA5SP390-201ENST00000410191 113 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RPL23AP95-201ENST00000426806 265 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AC244670.1-201ENST00000436879 112 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 snoU13.30-201ENST00000458951 104 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AC087477.1-201ENST00000465747 340 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RPL23AP75-201ENST00000491601 451 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AC016632.1-201ENST00000503994 196 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 SNORA25.11-201ENST00000515935 105 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MIR5188-201ENST00000583467 113 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 MIR3922-201ENST00000585192 84 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AC006130.2-201ENST00000586202 326 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 RPL23AP78-201ENST00000599928 470 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 AL137843.1-201ENST00000605078 385 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 U2.1-201ENST00000618978 145 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 SNORA43.4-201ENST00000629559 138 ntBASIC3.12□□□□□ -1.91
RLIMQ9NVW2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.12□□□□□ -1.91
RLIMQ9NVW2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MTND5P16-201ENST00000460269 1703 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms