Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNA5SP219-201ENST00000390940 113 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
SSX3Q99909 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.15□□□□□ -2.07
SSX3Q99909 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC112220.1-201ENST00000434628 355 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC007969.2-201ENST00000441891 191 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.15□□□□□ -2.07
SSX3Q99909 AL031274.1-201ENST00000450334 232 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 MTCO3P38-201ENST00000468910 766 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX3Q99909 Y_RNA.693-201ENST00000516641 110 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.15□□□□□ -2.07
SSX3Q99909 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC090115.3-201ENST00000553218 849 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX3Q99909 AC007229.1-201ENST00000590455 412 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC087241.4-201ENST00000612441 480 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC008121.3-201ENST00000618726 433 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC099654.12-201ENST00000639868 649 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 AC002543.1-201ENST00000299783 1954 ntBASIC2.15□□□□□ -2.07
SSX3Q99909 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.15□□□□□ -2.07
SSX3Q99909 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SSX3Q99909 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
SSX3Q99909 Y_RNA.41-201ENST00000362646 102 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 RNU1-23P-201ENST00000363361 144 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 RNU6-1210P-201ENST00000363775 107 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 MIR544A-201ENST00000384855 91 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 MIR561-201ENST00000385216 97 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX3Q99909 AL356057.3-201ENST00000402607 340 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX3Q99909 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX3Q99909 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.14□□□□□ -2.07
SSX3Q99909 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX3Q99909 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.14□□□□□ -2.07
SSX3Q99909 AL031659.1-201ENST00000447075 539 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 RPL39P29-201ENST00000447779 157 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 TPTE2P5-203ENST00000458118 728 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AL121594.1-201ENST00000475906 575 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AC107032.1-201ENST00000485945 480 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX3Q99909 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX3Q99909 RPL23AP94-201ENST00000512518 302 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 RNU6-506P-201ENST00000516553 94 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX3Q99909 AC107953.1-201ENST00000522216 297 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 CYCSP27-201ENST00000527643 293 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.14□□□□□ -2.07
SSX3Q99909 AL512310.1-201ENST00000548639 172 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 AC093249.1-201ENST00000567049 203 ntBASIC2.14□□□□□ -2.07
SSX3Q99909 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.14□□□□□ -2.07
SSX3Q99909 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSX3Q99909 Y_RNA.40-201ENST00000362645 93 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-428P-201ENST00000362942 107 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 SNORA25B-201ENST00000365507 128 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 MIR95-201ENST00000385072 81 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 SNORA11.2-201ENST00000408318 127 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-293P-201ENST00000411259 106 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RPLP0P7-201ENST00000416050 667 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX3Q99909 AL589823.1-201ENST00000429577 183 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX3Q99909 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX3Q99909 AC019235.1-201ENST00000503847 207 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-1038P-201ENST00000516516 104 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-314P-201ENST00000516574 104 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-835P-201ENST00000516974 104 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
SSX3Q99909 CENPUP1-201ENST00000526649 1202 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 OR11H5P-201ENST00000554039 926 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AC233702.2-202ENST00000562547 291 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX3Q99909 MIR4635-201ENST00000583759 79 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 VN1R80P-201ENST00000597126 338 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 RNU6-85P-201ENST00000605989 107 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AC090517.3-201ENST00000625170 141 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
SSX3Q99909 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
SSX3Q99909 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSX3Q99909 MIR449A-201ENST00000362113 91 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 SNORD62.1-201ENST00000362541 86 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 RNU6-82P-201ENST00000363970 107 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 U3.13-201ENST00000364804 214 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 RNU6-336P-201ENST00000364891 107 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 Y_RNA.372-201ENST00000365599 102 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SSX3Q99909 RNU6-780P-201ENST00000391030 104 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX3Q99909 POLHP1-201ENST00000411806 470 ntBASIC2.12□□□□□ -2.07
SSX3Q99909 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX3Q99909 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms