Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.480-201ENST00000384364 102 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 RNU6-434P-201ENST00000384376 107 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 RNU6-393P-201ENST00000384475 107 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AF228730.1-201ENST00000397972 663 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 RNU2-29P-201ENST00000410423 189 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF560Q96MR9 USP9YP18-201ENST00000425912 695 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF560Q96MR9 MTND1P26-201ENST00000440488 538 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 USP9YP8-201ENST00000441913 500 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC107032.1-201ENST00000485945 480 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 RPL30P1-201ENST00000488676 339 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC107953.1-201ENST00000522216 297 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 SUB1P2-201ENST00000556401 297 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AL158827.2-201ENST00000602494 330 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AC022418.1-201ENST00000624118 445 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 AL691447.3-201ENST00000635020 330 ntBASIC2.13□□□□□ -2.07
ZNF560Q96MR9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF560Q96MR9 RNU6-527P-201ENST00000363425 104 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 MIR29B2-201ENST00000385055 81 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AL358934.1-201ENST00000432346 324 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 HMGN2P3-201ENST00000433603 273 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 HMGN2P5-201ENST00000436882 273 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 MTND4P32-201ENST00000437189 1237 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 RPL39P29-201ENST00000447779 157 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AL356010.1-201ENST00000456364 102 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC006512.1-201ENST00000468816 291 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 RPL30P12-201ENST00000474666 353 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AL031274.2-201ENST00000599419 203 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 SNRPGP17-201ENST00000603780 214 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC025449.1-201ENST00000603896 529 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC005609.4-201ENST00000625071 447 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AC090517.3-201ENST00000625170 141 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
ZNF560Q96MR9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 SNORA75-201ENST00000384158 137 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 RNU6-1127P-201ENST00000384580 107 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 SNORD70.1-201ENST00000391007 85 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 RNU2-48P-201ENST00000410694 191 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 MTATP6P18-201ENST00000417994 673 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 RNU6-956P-201ENST00000458868 103 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC079382.1-201ENST00000493346 557 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC010486.3-201ENST00000511602 785 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC117532.1-201ENST00000514638 323 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC109479.2-201ENST00000517842 174 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AL356057.1-201ENST00000533798 831 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC023050.3-201ENST00000541142 333 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 MTCO3P23-201ENST00000561363 289 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AC091135.1-201ENST00000585943 307 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 AP001596.2-201ENST00000608410 312 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 ZNF680P1-201ENST00000436625 1469 ntBASIC2.11□□□□□ -2.07
ZNF560Q96MR9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ZNF560Q96MR9 ELL2P3-201ENST00000457883 1602 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 MTND4P1-201ENST00000457501 1466 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-37P-201ENST00000362692 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 Y_RNA.77-201ENST00000362962 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-105P-201ENST00000363909 104 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-11P-201ENST00000364234 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-1303P-201ENST00000364841 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-25P-201ENST00000383873 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-1-201ENST00000383898 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-48P-201ENST00000384161 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-36P-201ENST00000384172 107 ntBASIC2.1□□□□□ -2.07
ZNF560Q96MR9 RNU6-4P-201ENST00000384205 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms