Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 RNU6-88P-201ENST00000606801 100 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC009269.6-201ENST00000621778 588 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 AC112204.3-201ENST00000623822 332 ntBASIC0.74□□□□□ -2.29
ALPK3Q96L96 RNU6-414P-201ENST00000363705 104 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 RNU6-188P-201ENST00000364207 107 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 SNORD116-20-201ENST00000384529 92 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AL359704.1-201ENST00000411586 781 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.73□□□□□ -2.29
ALPK3Q96L96 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ALPK3Q96L96 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
ALPK3Q96L96 RNA5SP269-201ENST00000459032 137 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 HMGB1P28-201ENST00000507778 552 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.73□□□□□ -2.29
ALPK3Q96L96 RNU2-53P-201ENST00000516257 147 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.73□□□□□ -2.29
ALPK3Q96L96 COPS8P3-201ENST00000526024 482 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AC087897.1-201ENST00000550134 156 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 MIR4293-201ENST00000584305 78 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AP001981.2-201ENST00000603241 418 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AL161798.1-201ENST00000604630 131 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 AL163152.1-201ENST00000642001 374 ntBASIC0.73□□□□□ -2.29
ALPK3Q96L96 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL627311.1-201ENST00000431514 115 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 SNRPEP7-201ENST00000438350 220 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 EEF1E1P1-201ENST00000446998 430 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC093899.1-201ENST00000457984 376 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 MTCYBP40-201ENST00000509390 1135 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 MTCYBP43-201ENST00000513621 740 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 SNORA31.19-201ENST00000517079 126 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 DEFB130C-202ENST00000530001 230 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC023538.1-201ENST00000534576 736 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC093012.1-202ENST00000549403 582 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL358072.1-201ENST00000604156 575 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 MIR8065-201ENST00000620577 100 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNU5B-4P-201ENST00000363508 111 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL079342.2-201ENST00000403367 482 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 MIR320C1-201ENST00000408566 88 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNA5SP100-201ENST00000410903 110 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNA5SP59-201ENST00000410922 110 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNA5SP127-201ENST00000411051 133 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL353621.1-201ENST00000418219 243 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC010153.1-201ENST00000432862 727 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC099513.1-201ENST00000490423 301 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 MTND2P33-201ENST00000506452 1031 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC009646.1-201ENST00000510455 318 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 RNU6-1225P-201ENST00000516336 65 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 OR8K2P-201ENST00000524645 927 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.72□□□□□ -2.29
ALPK3Q96L96 AL354696.1-201ENST00000614652 497 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.72□□□□□ -2.29
ALPK3Q96L96 ELL2P3-201ENST00000457883 1602 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 RNA5SP493-201ENST00000364115 91 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 SNORA22-201ENST00000383907 134 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 SNORA29-201ENST00000384183 140 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 SNORA22C-201ENST00000384614 134 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC104651.1-201ENST00000427559 735 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC000111.3-201ENST00000433478 193 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 TIMM9P1-201ENST00000436122 256 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC093259.1-201ENST00000509755 300 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 RNU6-334P-201ENST00000517072 102 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC136618.2-201ENST00000575091 400 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AC004908.3-201ENST00000610248 625 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AL159153.1-201ENST00000619688 317 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 AP000943.4-201ENST00000622912 357 ntBASIC0.71□□□□□ -2.3
ALPK3Q96L96 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
ALPK3Q96L96 SNORD33-201ENST00000362761 85 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 SNORA4.3-201ENST00000365564 137 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 Y_RNA.412-201ENST00000384001 104 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 RNA5SP390-201ENST00000410191 113 ntBASIC0.7□□□□□ -2.3
ALPK3Q96L96 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.7□□□□□ -2.3
ALPK3Q96L96 UBE2D3P3-201ENST00000426992 425 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms