Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP000770.2-201ENST00000623694 100 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VMP1Q96GC9 RNU6-1285P-201ENST00000363480 105 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 RNU1-51P-201ENST00000365345 176 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 RNU6-606P-201ENST00000384721 111 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 SNORD70.1-201ENST00000391007 85 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 SNORD56-201ENST00000413522 71 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 KATNBL1P3-201ENST00000443475 909 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 AP005660.1-201ENST00000522972 293 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 AC091805.2-201ENST00000603848 235 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 AL022345.1-201ENST00000607292 135 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 MIR1248-201ENST00000629190 106 ntBASIC2.18□□□□□ -2.06
VMP1Q96GC9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
VMP1Q96GC9 SNORA11.2-201ENST00000408318 127 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.17□□□□□ -2.06
VMP1Q96GC9 AL118520.1-201ENST00000450770 291 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC093259.1-201ENST00000509755 300 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 MTND3P5-201ENST00000512798 333 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC007375.1-201ENST00000554513 578 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC009063.1-201ENST00000563342 702 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 BNIP3P16-201ENST00000589779 534 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC068790.2-201ENST00000602601 557 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 AC018889.1-201ENST00000605372 397 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VMP1Q96GC9 U1.36-201ENST00000620684 176 ntBASIC2.17□□□□□ -2.06
VMP1Q96GC9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VMP1Q96GC9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VMP1Q96GC9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VMP1Q96GC9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 AP000568.1-201ENST00000282964 442 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNU1-58P-201ENST00000362413 163 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNA5SP126-201ENST00000365092 109 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AL135786.1-201ENST00000415892 214 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC092447.3-201ENST00000426027 686 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC079382.1-201ENST00000493346 557 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC092436.1-201ENST00000506450 503 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNU2-69P-201ENST00000516061 100 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNA5SP281-201ENST00000516504 135 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 RNU2-44P-201ENST00000516795 194 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
VMP1Q96GC9 MIR3913-1-201ENST00000577744 102 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC040904.1-201ENST00000590850 223 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AL078605.1-201ENST00000603529 500 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC109347.2-201ENST00000610220 349 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 AC064859.1-201ENST00000624741 174 ntBASIC2.16□□□□□ -2.06
VMP1Q96GC9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
VMP1Q96GC9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
VMP1Q96GC9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VMP1Q96GC9 RNU2-29P-201ENST00000410423 189 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL030996.1-201ENST00000411430 235 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL451074.3-201ENST00000437709 472 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL360221.1-201ENST00000445989 335 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC132479.1-201ENST00000449160 144 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 C1DP4-201ENST00000455429 424 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 SCARNA18-201ENST00000459004 134 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 MTCO2P6-201ENST00000463134 685 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 SNRPGP7-201ENST00000469016 106 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 ANXA2P1-201ENST00000505539 926 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC105417.1-201ENST00000514691 285 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 TRAV32-201ENST00000553993 340 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 SUB1P2-201ENST00000556401 297 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 BNIP3P25-201ENST00000596023 559 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 CYP2C61P-201ENST00000604072 290 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AP000654.2-201ENST00000605633 586 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC104073.3-201ENST00000610942 955 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC099842.1-201ENST00000619919 596 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 AC120349.3-201ENST00000624377 529 ntBASIC2.15□□□□□ -2.07
VMP1Q96GC9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 RNU6-336P-201ENST00000364891 107 ntBASIC2.14□□□□□ -2.07
VMP1Q96GC9 RNU6-1127P-201ENST00000384580 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms