Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM11Q96F44 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM11Q96F44 SCARNA4-202ENST00000625402 129 ntBASIC4.42□□□□□ -1.7
TRIM11Q96F44 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM11Q96F44 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM11Q96F44 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 U8.10-201ENST00000384260 133 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 AC244098.2-201ENST00000422068 99 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AC007560.1-201ENST00000426912 237 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 RNU6-966P-201ENST00000516479 104 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AL138963.2-201ENST00000605137 226 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AL353748.2-201ENST00000622148 471 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 AC092628.2-201ENST00000622492 339 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 AC241585.2-209ENST00000638217 143 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 Z82217.1-201ENST00000625157 8149 ntBASIC4.41□□□□□ -1.7
TRIM11Q96F44 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM11Q96F44 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TRIM11Q96F44 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM11Q96F44 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
TRIM11Q96F44 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.7
TRIM11Q96F44 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TRIM11Q96F44 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM11Q96F44 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM11Q96F44 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
TRIM11Q96F44 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM11Q96F44 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
TRIM11Q96F44 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 SNORA22-201ENST00000383907 134 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 SNORA29-201ENST00000384183 140 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNA5SP89-201ENST00000410300 108 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNA5SP39-201ENST00000411245 120 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 AL078601.1-201ENST00000444542 271 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNA5SP246-201ENST00000458909 119 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNU5E-3P-201ENST00000515913 68 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNU6-1198P-201ENST00000516904 67 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 RNU6-58P-201ENST00000517143 103 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM11Q96F44 AL356218.2-201ENST00000605264 187 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 AC027309.3-201ENST00000623419 351 ntBASIC4.4□□□□□ -1.71
TRIM11Q96F44 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TRIM11Q96F44 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM11Q96F44 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM11Q96F44 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 MTND5P32-201ENST00000560711 1802 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 Y_RNA.595-201ENST00000410403 105 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC092798.1-201ENST00000458542 409 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 RNU7-107P-201ENST00000459121 61 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 Y_RNA.637-201ENST00000459424 114 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC109327.1-201ENST00000471666 403 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 RN7SL271P-201ENST00000487601 295 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL049874.1-201ENST00000489560 388 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC139453.3-201ENST00000493276 369 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 RPL29P14-201ENST00000495837 428 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 RNU6-168P-201ENST00000516189 101 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 SNORA70.14-201ENST00000516205 110 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 Y_RNA.694-201ENST00000516677 117 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 Y_RNA.712-201ENST00000517011 92 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC016256.1-201ENST00000547971 354 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC090049.2-201ENST00000550377 109 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 TVP23BP1-201ENST00000557500 617 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC090877.1-201ENST00000561418 344 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AC069294.1-201ENST00000608397 350 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL357075.2-201ENST00000614906 189 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL591926.4-201ENST00000616895 298 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AP001340.1-201ENST00000624405 217 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL034408.1-202ENST00000636088 415 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 MAPK10-373ENST00000641983 6772 ntBASIC4.39□□□□□ -1.71
TRIM11Q96F44 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM11Q96F44 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM11Q96F44 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms