Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AP006587.4-201ENST00000526053 529 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 AP000763.2-201ENST00000540641 163 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.01□□□□□ -2.25
TOPBP1Q92547 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.01□□□□□ -2.25
TOPBP1Q92547 BNIP3P26-201ENST00000600827 554 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 AC124016.2-201ENST00000610058 665 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 AC004908.3-201ENST00000610248 625 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 MIR8074-201ENST00000615081 81 ntBASIC1.01□□□□□ -2.25
TOPBP1Q92547 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.01□□□□□ -2.25
TOPBP1Q92547 ZNF680P1-201ENST00000436625 1469 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 RNU6-529P-201ENST00000363383 104 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 RNU6-1284P-201ENST00000363701 100 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 RNU6-1164P-201ENST00000364428 107 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 SNORA4.3-201ENST00000365564 137 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 RNU6-338P-201ENST00000383888 105 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 SNORD14D-201ENST00000384390 87 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 MIR597-201ENST00000384968 97 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
TOPBP1Q92547 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1□□□□□ -2.25
TOPBP1Q92547 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1□□□□□ -2.25
TOPBP1Q92547 AL359704.1-201ENST00000411586 781 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 Z99497.1-201ENST00000421282 135 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 RAC1P6-201ENST00000423911 575 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1□□□□□ -2.25
TOPBP1Q92547 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1□□□□□ -2.25
TOPBP1Q92547 AC087894.1-201ENST00000538359 518 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1□□□□□ -2.25
TOPBP1Q92547 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1□□□□□ -2.25
TOPBP1Q92547 MIR4293-201ENST00000584305 78 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 AP002802.2-201ENST00000605877 235 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 AL158163.2-201ENST00000619110 700 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 MIR338-201ENST00000636369 67 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1□□□□□ -2.25
TOPBP1Q92547 Y_RNA.67-201ENST00000362870 100 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 RNU6-224P-201ENST00000384055 107 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 Y_RNA.578-201ENST00000390903 88 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 SNORA40C-201ENST00000391285 128 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 USP9YP21-201ENST00000420603 432 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AL354941.1-201ENST00000438600 464 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC022616.8-201ENST00000533569 253 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC093249.1-201ENST00000567049 203 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC067863.3-201ENST00000624172 122 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC091948.2-201ENST00000636510 279 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 MIR26B-201ENST00000362251 77 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC119751.3-201ENST00000399720 670 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 MIR1305-201ENST00000408300 86 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 NCOR1P3-201ENST00000420479 303 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC013262.1-201ENST00000426710 252 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 MTCO2P25-201ENST00000447065 681 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC112198.4-201ENST00000515450 351 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 RNU6-229P-201ENST00000516614 102 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 SNORA31.19-201ENST00000517079 126 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AP003392.2-201ENST00000527269 208 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AL136520.1-202ENST00000555494 763 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.99□□□□□ -2.25
TOPBP1Q92547 AC009269.6-201ENST00000621778 588 ntBASIC0.99□□□□□ -2.25
TOPBP1Q92547 RNU6-1010P-201ENST00000362757 107 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 RNU6-777P-201ENST00000364265 104 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 MIR301A-201ENST00000385261 86 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 RNA5SP100-201ENST00000410903 110 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 RNA5SP59-201ENST00000410922 110 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 USP9YP18-201ENST00000425912 695 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.98□□□□□ -2.25
TOPBP1Q92547 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.98□□□□□ -2.25
TOPBP1Q92547 AC112492.4-201ENST00000456549 352 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 HMGN1P10-201ENST00000474557 553 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 MTCO3P27-201ENST00000514397 196 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 MTND1P36-201ENST00000522384 936 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 DEFB108A-201ENST00000530110 222 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.98□□□□□ -2.25
TOPBP1Q92547 MIR4422-201ENST00000581938 83 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 AC008507.2-201ENST00000588402 1176 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 AC073410.2-201ENST00000603240 332 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 AC245060.5-201ENST00000610778 3293 ntBASIC0.98□□□□□ -2.25
TOPBP1Q92547 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TOPBP1Q92547 RNU6-560P-201ENST00000364007 108 ntBASIC0.97□□□□□ -2.25
TOPBP1Q92547 RNA5SP331-201ENST00000364986 107 ntBASIC0.97□□□□□ -2.25
TOPBP1Q92547 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TOPBP1Q92547 RNU6-166P-201ENST00000384371 107 ntBASIC0.97□□□□□ -2.25
TOPBP1Q92547 MIR1265-201ENST00000408444 86 ntBASIC0.97□□□□□ -2.25
TOPBP1Q92547 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.97□□□□□ -2.25
TOPBP1Q92547 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.97□□□□□ -2.25
TOPBP1Q92547 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms