Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPL37P10-201ENST00000412884 288 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 ATG3P1-201ENST00000419507 911 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC087499.2-201ENST00000432861 149 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AP001324.2-201ENST00000461163 319 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC018437.1-201ENST00000492214 406 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC116337.1-201ENST00000509680 687 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 SCARNA17.1-201ENST00000516211 143 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 SCARNA17.2-201ENST00000516334 143 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC093331.1-201ENST00000521474 169 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 CKS1BP7-201ENST00000522230 235 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 GLYCAM1-201ENST00000546596 285 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 IMMP1LP2-201ENST00000552954 492 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGB4Q8WW32 C8orf59P2-201ENST00000603441 271 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 SCARNA17.4-201ENST00000614296 143 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 MIR6128-201ENST00000615528 109 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC024581.2-201ENST00000619986 252 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 IGHVIII-44-202ENST00000636235 289 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 MIR1302-1-201ENST00000637932 143 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 AC241585.2-209ENST00000638217 143 ntBASIC2.96□□□□□ -1.94
HMGB4Q8WW32 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGB4Q8WW32 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC062016.1-201ENST00000355719 319 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RNU6-692P-201ENST00000384496 107 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 MIR517A-201ENST00000385001 87 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AL133475.1-201ENST00000404414 305 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RNA5SP390-201ENST00000410191 113 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RNU4-14P-201ENST00000410858 122 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 NUP35P1-201ENST00000422734 947 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RPL23AP22-201ENST00000437556 453 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC124916.1-201ENST00000444020 547 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC108938.1-201ENST00000451204 136 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 U8.21-201ENST00000459536 136 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RPS29P27-201ENST00000463711 170 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 PTP4A1P4-201ENST00000512479 322 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RNU6-612P-201ENST00000516909 102 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 SCARNA11.3-201ENST00000517276 130 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC090897.2-201ENST00000581715 130 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 RPS15AP11-201ENST00000594193 385 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC113139.1-201ENST00000605049 239 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC016727.1-205ENST00000605437 569 ntBASIC2.95□□□□□ -1.94
HMGB4Q8WW32 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGB4Q8WW32 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RNU4-73P-201ENST00000363164 141 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RNU6-593P-201ENST00000364716 112 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 Y_RNA.482-201ENST00000384377 111 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RPL32P35-201ENST00000415214 394 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RPS12P18-201ENST00000442381 270 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 PCMTD1P1-201ENST00000455560 355 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 Y_RNA.635-201ENST00000459041 101 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 RNA5SP217-201ENST00000515959 91 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AC124303.1-201ENST00000605703 360 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AL359697.1-201ENST00000624879 587 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AC073476.4-201ENST00000628409 72 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGB4Q8WW32 AL109809.4-201ENST00000603520 2185 ntBASIC2.94□□□□□ -1.94
HMGB4Q8WW32 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGB4Q8WW32 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-1083P-201ENST00000384022 107 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-933P-201ENST00000384424 107 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-306P-201ENST00000384617 107 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-1140P-201ENST00000410517 106 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-1245P-201ENST00000411130 106 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AC245054.2-201ENST00000415639 319 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RPL23AP58-201ENST00000440453 469 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AL109933.2-201ENST00000452651 260 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU6-1016P-201ENST00000516689 94 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 RNU1-54P-201ENST00000517181 120 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AP005902.1-201ENST00000521358 186 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AL355375.2-201ENST00000574825 175 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AP001836.1-201ENST00000604675 523 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AC019193.3-201ENST00000609144 554 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 AC013412.1-201ENST00000610687 192 ntBASIC2.93□□□□□ -1.94
HMGB4Q8WW32 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms