Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA70.4-201ENST00000365509 134 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-541P-201ENST00000384709 110 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 SNORA40.19-201ENST00000390846 128 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 Z85995.1-201ENST00000415547 335 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC007560.1-201ENST00000426912 237 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 Z82210.1-201ENST00000440037 231 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC005042.3-201ENST00000453230 174 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC006517.1-201ENST00000480485 328 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC139453.3-201ENST00000493276 369 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 RNU4-57P-201ENST00000515980 135 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 Y_RNA.686-201ENST00000516548 134 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-1234P-201ENST00000516877 103 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 RNA5SP165-201ENST00000517142 115 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AP002001.1-203ENST00000534002 267 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 UBL5P4-201ENST00000562584 236 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 AC008739.3-201ENST00000603262 127 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 SNORA51-201ENST00000606420 132 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 MARK2P15-201ENST00000432204 2186 ntBASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHKBP1Q8TBC3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-834P-201ENST00000362367 110 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-275P-201ENST00000364910 107 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNA5SP97-201ENST00000365006 84 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU4-17P-201ENST00000365598 141 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 U8.10-201ENST00000384260 133 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 HLFP1-201ENST00000402375 499 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 EIF1AXP1-201ENST00000419267 435 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AL078601.1-201ENST00000444542 271 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RPS20P22-201ENST00000473700 357 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-966P-201ENST00000516479 104 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-572P-201ENST00000516724 80 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AC090281.1-201ENST00000523019 276 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AL121603.1-201ENST00000553815 142 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AL360157.1-201ENST00000565962 87 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 MIR4727-201ENST00000622232 55 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AC008873.1-201ENST00000625051 138 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 AC110774.1-201ENST00000623567 2018 ntBASIC4.11□□□□□ -1.75
SHKBP1Q8TBC3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AL391516.1-201ENST00000554380 2449 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC092593.1-201ENST00000515413 1815 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-1272P-201ENST00000362776 107 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 Y_RNA.319-201ENST00000365138 92 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-72P-201ENST00000384285 79 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-159P-201ENST00000391080 106 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC093578.1-201ENST00000415219 368 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RPL30P13-201ENST00000418873 348 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 RPS15AP5-201ENST00000436276 388 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC124916.1-201ENST00000444020 547 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 PDCD5P2-201ENST00000507570 312 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 SNORA25.12-201ENST00000516202 82 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 SCARNA14-201ENST00000516903 136 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 DEFB131C-201ENST00000528817 165 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC068831.7-201ENST00000616954 363 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 AC093535.2-201ENST00000624769 2326 ntBASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.1□□□□□ -1.75
SHKBP1Q8TBC3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 FTLP6-201ENST00000355274 422 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-137P-201ENST00000363680 108 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 U1.1-201ENST00000384101 164 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 SNORA29-201ENST00000384183 140 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-80P-201ENST00000384195 107 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms