Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LINC01399-202ENST00000458450 244 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RPS26P21-201ENST00000475397 348 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RPL30P14-201ENST00000482744 348 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AC067942.3-201ENST00000512025 362 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RNU2-53P-201ENST00000516257 147 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AC091144.1-201ENST00000519573 138 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 HSPE1P20-201ENST00000538133 289 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AC025884.1-201ENST00000556034 378 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AL590392.1-201ENST00000604960 446 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AL356157.2-201ENST00000605122 111 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 SNORA62.6-201ENST00000606322 83 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 U6.92-201ENST00000636464 89 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RNU6-222P-201ENST00000362438 107 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.183-201ENST00000363882 113 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 SNORD115-32-201ENST00000364079 82 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.288-201ENST00000364854 92 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 SNORA29-201ENST00000384183 140 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RNY3P4-201ENST00000384428 101 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RNU6-843P-201ENST00000384454 104 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC023141.4-201ENST00000412031 328 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 BX679664.1-201ENST00000434429 253 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC010099.1-201ENST00000455434 375 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC025465.3-201ENST00000510570 311 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RNU6-1143P-201ENST00000516125 104 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 ACA59.2-201ENST00000517061 156 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC120057.2-201ENST00000571520 271 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC090617.3-201ENST00000573670 475 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AL591034.3-201ENST00000605511 685 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RMST_6.1-201ENST00000611980 203 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 MIR6500-201ENST00000622700 86 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIPK4Q8NE63 ZNF826P-207ENST00000622273 1910 ntBASIC3.5□□□□□ -1.85
HIPK4Q8NE63 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 OR56A5-201ENST00000340110 738 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 RNU5B-2P-201ENST00000363036 113 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 MIR544A-201ENST00000384855 91 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 RNU6-628P-201ENST00000410675 107 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 SDAD1P3-201ENST00000427380 333 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC006539.3-201ENST00000454258 129 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC087477.1-201ENST00000465747 340 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 MIR2355-201ENST00000517199 87 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 CKS1BP7-201ENST00000522230 235 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC091903.1-201ENST00000624322 454 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 MIR3529-201ENST00000637713 78 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
HIPK4Q8NE63 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HIPK4Q8NE63 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HIPK4Q8NE63 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.48□□□□□ -1.85
HIPK4Q8NE63 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HIPK4Q8NE63 SPRR2C-201ENST00000290702 219 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 AC068538.1-201ENST00000376856 336 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.447-201ENST00000384184 113 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.518-201ENST00000384552 113 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 MIR32-201ENST00000384965 70 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 EI24P2-201ENST00000397776 1076 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 MIR1302-6-201ENST00000408466 90 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 RPL21P38-201ENST00000418090 167 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.48□□□□□ -1.85
HIPK4Q8NE63 SNORD127-201ENST00000458892 86 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 RN7SL442P-201ENST00000473804 320 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 RN7SKP272-201ENST00000516988 232 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 AP003733.2-201ENST00000529409 171 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 AP000867.2-201ENST00000532468 320 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIPK4Q8NE63 AC016256.1-201ENST00000547971 354 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 MIR5571-201ENST00000577998 113 ntBASIC3.48□□□□□ -1.85
HIPK4Q8NE63 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms