Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF38AQ8NAV1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF38AQ8NAV1 AC010329.5-201ENST00000623497 2174 ntBASIC3.58□□□□□ -1.84
PRPF38AQ8NAV1 MIR22-201ENST00000362190 85 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-227P-201ENST00000362865 103 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1317P-201ENST00000364582 104 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 MIR517A-201ENST00000385001 87 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AP000275.1-201ENST00000411943 390 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 NUP35P1-201ENST00000422734 947 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 RPL36AP48-201ENST00000485521 314 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AP001025.1-201ENST00000486139 332 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1016P-201ENST00000516689 94 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC109329.1-201ENST00000518744 317 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AP005902.1-201ENST00000521358 186 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 MIR4765-201ENST00000585007 77 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC241585.2-209ENST00000638217 143 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 AC000403.1-201ENST00000613696 3585 ntBASIC3.57□□□□□ -1.84
PRPF38AQ8NAV1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1222P-201ENST00000384615 107 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 SNORD67-201ENST00000390833 111 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 RPS15AP7-201ENST00000439294 405 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC107083.1-201ENST00000439643 279 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC243964.1-201ENST00000441814 261 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC096576.1-201ENST00000489014 359 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 ACA59.1-201ENST00000515966 143 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 RN7SKP282-201ENST00000516824 299 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 RPS3AP23-202ENST00000574601 686 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 POLR3GP2-201ENST00000588366 668 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AP001836.1-201ENST00000604675 523 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AC090617.7-201ENST00000623952 126 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 AL137790.1-201ENST00000634283 177 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 MIR1302-1-201ENST00000637932 143 ntBASIC3.56□□□□□ -1.84
PRPF38AQ8NAV1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 Y_RNA.151-201ENST00000363566 112 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 Y_RNA.387-201ENST00000383918 102 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 RPL21P3-201ENST00000395517 478 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 Z96811.1-201ENST00000445880 108 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC146507.2-201ENST00000460608 476 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 RNA5SP385-201ENST00000515947 110 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 RN7SKP272-201ENST00000516988 232 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC115990.1-201ENST00000526957 301 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 HPRT1P3-201ENST00000539521 576 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 MIR8076-201ENST00000611401 83 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.55□□□□□ -1.84
PRPF38AQ8NAV1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-486P-201ENST00000363116 107 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 RNU6-601P-201ENST00000384540 107 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 Y_RNA.529-201ENST00000384586 119 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 MIR544A-201ENST00000384855 91 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC245054.2-201ENST00000415639 319 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 RPL39P29-201ENST00000447779 157 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC112771.1-201ENST00000463581 102 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 SNORA25.11-201ENST00000515935 105 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 COX6CP5-201ENST00000527162 228 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC079598.5-201ENST00000547460 117 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 MIR4506-201ENST00000584693 77 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AL033523.1-201ENST00000605153 153 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC104985.2-201ENST00000620598 500 ntBASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF38AQ8NAV1 AC026241.1-201ENST00000517873 2142 ntBASIC3.53□□□□□ -1.84
PRPF38AQ8NAV1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms