Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HERC6Q8IVU3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HERC6Q8IVU3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 SNORD56.1-201ENST00000362913 68 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 U8.2-201ENST00000363156 134 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 RNU6-128P-201ENST00000383976 107 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AL078595.1-201ENST00000404458 226 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC097463.2-201ENST00000421074 142 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 MTCO3P18-201ENST00000440206 761 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC087884.1-201ENST00000469738 328 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC117503.1-201ENST00000472241 394 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AK3P2-201ENST00000507976 429 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AL121579.1-201ENST00000555129 305 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 MIR4769-201ENST00000584126 77 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 RPS15AP11-201ENST00000594193 385 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 BNIP3P25-201ENST00000596023 559 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 VN1R107P-201ENST00000601784 209 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC123912.5-201ENST00000605470 343 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AL627309.6-201ENST00000606857 840 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC092794.2-201ENST00000620933 563 ntBASIC2.98□□□□□ -1.93
HERC6Q8IVU3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HERC6Q8IVU3 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 U8.9-201ENST00000365667 134 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AL162578.1-201ENST00000406202 378 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 MICF-203ENST00000432679 129 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 RN7SL499P-201ENST00000481141 276 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 FAM206BP-201ENST00000510179 541 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 SNORA31.6-201ENST00000516241 130 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 SNORA20.3-201ENST00000516880 132 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC025423.5-201ENST00000550230 219 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC060780.3-201ENST00000589464 80 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC069234.5-201ENST00000611056 416 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 AC007792.1-201ENST00000623023 402 ntBASIC2.97□□□□□ -1.93
HERC6Q8IVU3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
HERC6Q8IVU3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 RNU6-254P-201ENST00000363377 107 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 SNORA72.1-201ENST00000363485 129 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 Y_RNA.414-201ENST00000384011 101 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 RNU6-510P-201ENST00000391239 108 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 SNORA26.7-201ENST00000391288 122 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 RNU6-876P-201ENST00000391295 104 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC104332.2-201ENST00000429959 156 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 RNU6-1314P-201ENST00000517139 104 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 RN7SKP256-201ENST00000517201 314 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 SNORA31.23-201ENST00000517219 133 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC109329.1-201ENST00000518744 317 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC100830.2-201ENST00000581636 240 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC018638.8-201ENST00000588755 281 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC009033.1-201ENST00000624279 431 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 AC090617.10-201ENST00000624308 134 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 ZNF658B-202ENST00000615961 3375 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
HERC6Q8IVU3 Z75746.1-201ENST00000440243 2080 ntBASIC2.96□□□□□ -1.94
HERC6Q8IVU3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HERC6Q8IVU3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HERC6Q8IVU3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HERC6Q8IVU3 Y_RNA.86-201ENST00000363020 111 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 Y_RNA.167-201ENST00000363735 109 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 RNU6-105P-201ENST00000363909 104 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 RNU6-827P-201ENST00000365553 106 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 AL513475.1-201ENST00000406602 315 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 BX276092.3-201ENST00000424182 230 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 MTND4LP16-201ENST00000440828 295 ntBASIC2.95□□□□□ -1.94
HERC6Q8IVU3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.95□□□□□ -1.94
HERC6Q8IVU3 AC013470.1-201ENST00000453438 462 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms