Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 RNU6-87P-201ENST00000607561 108 ntBASIC0.25□□□□□ -2.37
CCDC58Q4VC31 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.25□□□□□ -2.37
CCDC58Q4VC31 snoU2_19.1-201ENST00000362361 80 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-353P-201ENST00000364266 108 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-343P-201ENST00000364709 104 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-622P-201ENST00000384272 103 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-1235P-201ENST00000384559 107 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-1176P-201ENST00000390955 107 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 NEFMP1-201ENST00000443423 1006 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNU6-498P-201ENST00000459468 107 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 FABP5P5-201ENST00000515537 406 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 SNORA31.3-201ENST00000516029 96 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNA5SP490-201ENST00000517141 136 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.24□□□□□ -2.37
CCDC58Q4VC31 AL445264.1-201ENST00000621719 171 ntBASIC0.24□□□□□ -2.37
CCDC58Q4VC31 RNA5SP259-201ENST00000365541 109 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AC007000.2-201ENST00000442564 487 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 GAPDHP17-201ENST00000449858 1001 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 RPS26P45-201ENST00000471748 340 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 RNU6-1053P-201ENST00000515930 101 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 SNORD79.1-201ENST00000516069 84 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 SNORA31.19-201ENST00000517079 126 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AP001189.2-201ENST00000527320 189 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AL391001.1-201ENST00000602747 715 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AC005858.4-201ENST00000623191 700 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 AC092656.1-203ENST00000624134 423 ntBASIC0.23□□□□□ -2.37
CCDC58Q4VC31 MTND4P14-201ENST00000435799 1354 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 OR4G2P-201ENST00000328113 903 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 MIR337-201ENST00000362281 93 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 RNU6-216P-201ENST00000363282 104 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 RNU6-1019P-201ENST00000364424 107 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 RAC1P6-201ENST00000423911 575 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 VN1R42P-201ENST00000424651 344 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 FO393414.1-201ENST00000428697 1184 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 MTND1P30-201ENST00000441241 901 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC009646.1-201ENST00000510455 318 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC023050.2-201ENST00000544968 387 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC138915.2-201ENST00000569776 97 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 KATNBL1P5-201ENST00000605015 517 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AL451064.1-201ENST00000607718 471 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC253576.2-201ENST00000618815 580 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 AC009509.4-201ENST00000619202 509 ntBASIC0.22□□□□□ -2.37
CCDC58Q4VC31 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC58Q4VC31 RAP1BP3-201ENST00000407180 549 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 RPL21P24-201ENST00000413752 448 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC092423.1-201ENST00000430165 186 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC58Q4VC31 MTCO3P18-201ENST00000440206 761 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC58Q4VC31 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 MTCO3P7-201ENST00000510008 774 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC016727.2-201ENST00000603988 621 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC243829.6-201ENST00000612652 106 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC063943.3-201ENST00000615562 356 ntBASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC58Q4VC31 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.21□□□□□ -2.38
CCDC58Q4VC31 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CCDC58Q4VC31 RNU6-212P-201ENST00000362642 104 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 SNORD114-22-201ENST00000365423 72 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 MIR1276-201ENST00000408707 83 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AL591212.2-201ENST00000433923 257 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AL603825.1-201ENST00000438481 80 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 FTH1P25-201ENST00000447665 469 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 RPS29P1-201ENST00000465274 159 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AC023538.1-201ENST00000534576 736 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 AL356094.1-201ENST00000624663 1212 ntBASIC0.2□□□□□ -2.38
CCDC58Q4VC31 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC58Q4VC31 Y_RNA.338-201ENST00000365320 114 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 SNORA40C-201ENST00000391285 128 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.19□□□□□ -2.38
CCDC58Q4VC31 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 ISCA1P6-201ENST00000427740 390 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 RPL39P38-201ENST00000467018 153 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 AC048334.1-201ENST00000477975 159 ntBASIC0.19□□□□□ -2.38
CCDC58Q4VC31 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
CCDC58Q4VC31 RNU6-496P-201ENST00000516145 99 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms