Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SNORA31.17-201ENST00000516953 127 ntBASIC0.73□□□□□ -2.29
RFX7Q2KHR2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RFX7Q2KHR2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.73□□□□□ -2.29
RFX7Q2KHR2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.73□□□□□ -2.29
RFX7Q2KHR2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.73□□□□□ -2.29
RFX7Q2KHR2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.73□□□□□ -2.29
RFX7Q2KHR2 AC243829.3-201ENST00000622177 108 ntBASIC0.73□□□□□ -2.29
RFX7Q2KHR2 MIR3529-201ENST00000637713 78 ntBASIC0.73□□□□□ -2.29
RFX7Q2KHR2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.73□□□□□ -2.29
RFX7Q2KHR2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 Y_RNA.99-201ENST00000363138 105 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RNU6-529P-201ENST00000363383 104 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RNU6-468P-201ENST00000384003 109 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RPL17P35-201ENST00000432217 549 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 SNRPEP7-201ENST00000438350 220 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AL096829.2-201ENST00000446582 742 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 PAXBP1P1-201ENST00000449315 447 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RPL9P9-202ENST00000466501 579 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RPL39P36-201ENST00000490784 156 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 TRBVA-201ENST00000498804 316 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 SNORA31.3-201ENST00000516029 96 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 SNORA31.19-201ENST00000517079 126 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC021451.1-201ENST00000523498 1129 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 MIR3912-201ENST00000577566 105 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 SNORA77B-201ENST00000578179 125 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC126365.2-201ENST00000580630 379 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC112220.2-201ENST00000605513 533 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC093648.1-201ENST00000623546 606 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 AC112204.3-201ENST00000623822 332 ntBASIC0.72□□□□□ -2.29
RFX7Q2KHR2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
RFX7Q2KHR2 RNU6-853P-201ENST00000364306 107 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 RNU6-609P-201ENST00000365459 107 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 RNU6-160P-201ENST00000384591 107 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 MIR301A-201ENST00000385261 86 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 RNU6-278P-201ENST00000390945 109 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 UBE2V1P10-201ENST00000414685 269 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 TIMM9P2-201ENST00000419324 266 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 PIGFP2-201ENST00000421400 651 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 MED28P2-201ENST00000475771 317 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 AC010409.1-201ENST00000487382 476 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 AC092656.1-203ENST00000624134 423 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RFX7Q2KHR2 FARSBP1-201ENST00000435808 1778 ntBASIC0.71□□□□□ -2.3
RFX7Q2KHR2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNA5SP257-201ENST00000363023 116 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-289P-201ENST00000364093 107 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MIR29B2-201ENST00000385055 81 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC119751.3-201ENST00000399720 670 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC068533.2-201ENST00000411872 306 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 USP9YP33-201ENST00000412220 421 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RPS27P16-201ENST00000425758 201 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 HMGN1P33-201ENST00000432945 451 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MTCYBP42-201ENST00000444653 1130 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MTND2P3-201ENST00000452458 470 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC087477.1-201ENST00000465747 340 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MTCYBP40-201ENST00000509390 1135 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC093259.1-201ENST00000509755 300 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-496P-201ENST00000516145 99 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RN7SKP256-201ENST00000517201 314 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC009902.1-201ENST00000519351 183 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL021879.1-201ENST00000611756 288 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC093875.1-201ENST00000623688 504 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 PCMTD1P7-201ENST00000634506 357 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MIR330-201ENST00000362196 94 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-236P-201ENST00000363886 106 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-944P-201ENST00000364023 107 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 AC009518.2-201ENST00000418056 731 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 FTH1P12-201ENST00000432137 551 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MTCO3P5-201ENST00000433620 714 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.7□□□□□ -2.3
RFX7Q2KHR2 RNU6-953P-201ENST00000459154 107 ntBASIC0.7□□□□□ -2.3
RFX7Q2KHR2 MTND1P16-201ENST00000465177 898 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms