Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
TPM4P67936 SNORD32B-201ENST00000364460 84 ntBASIC0.99□□□□□ -2.25
TPM4P67936 SNORA11.2-201ENST00000408318 127 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.99□□□□□ -2.25
TPM4P67936 RPS15AP12-201ENST00000419498 388 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AC123900.1-201ENST00000420390 96 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.99□□□□□ -2.25
TPM4P67936 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.99□□□□□ -2.25
TPM4P67936 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.99□□□□□ -2.25
TPM4P67936 AC134050.1-201ENST00000495088 933 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AC112206.3-201ENST00000514578 389 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AC090578.1-201ENST00000604955 591 ntBASIC0.99□□□□□ -2.25
TPM4P67936 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
TPM4P67936 MIR340-201ENST00000362125 95 ntBASIC0.98□□□□□ -2.25
TPM4P67936 SNORD56.1-201ENST00000362913 68 ntBASIC0.98□□□□□ -2.25
TPM4P67936 RNU5E-6P-201ENST00000365574 115 ntBASIC0.98□□□□□ -2.25
TPM4P67936 RNU6-946P-201ENST00000383878 107 ntBASIC0.98□□□□□ -2.25
TPM4P67936 RPS27P1-201ENST00000450552 247 ntBASIC0.98□□□□□ -2.25
TPM4P67936 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.98□□□□□ -2.25
TPM4P67936 AC005741.1-201ENST00000511094 432 ntBASIC0.98□□□□□ -2.25
TPM4P67936 SUMO2P18-201ENST00000518873 252 ntBASIC0.98□□□□□ -2.25
TPM4P67936 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.98□□□□□ -2.25
TPM4P67936 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.98□□□□□ -2.25
TPM4P67936 BNIP3P6-201ENST00000549284 499 ntBASIC0.98□□□□□ -2.25
TPM4P67936 AC009977.1-201ENST00000586015 570 ntBASIC0.98□□□□□ -2.25
TPM4P67936 MZT1P2-201ENST00000604387 248 ntBASIC0.98□□□□□ -2.25
TPM4P67936 RNU6-511P-201ENST00000363496 107 ntBASIC0.97□□□□□ -2.25
TPM4P67936 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TPM4P67936 RNU6-1222P-201ENST00000384615 107 ntBASIC0.97□□□□□ -2.25
TPM4P67936 MIR1261-201ENST00000408659 82 ntBASIC0.97□□□□□ -2.25
TPM4P67936 BTF3P4-201ENST00000418852 495 ntBASIC0.97□□□□□ -2.25
TPM4P67936 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.97□□□□□ -2.25
TPM4P67936 AC245047.4-201ENST00000433189 144 ntBASIC0.97□□□□□ -2.25
TPM4P67936 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.97□□□□□ -2.25
TPM4P67936 AL122001.1-201ENST00000457027 370 ntBASIC0.97□□□□□ -2.25
TPM4P67936 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.97□□□□□ -2.25
TPM4P67936 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.97□□□□□ -2.25
TPM4P67936 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.97□□□□□ -2.25
TPM4P67936 MIR449C-201ENST00000516047 92 ntBASIC0.97□□□□□ -2.25
TPM4P67936 Y_RNA.689-201ENST00000516589 107 ntBASIC0.97□□□□□ -2.25
TPM4P67936 RNA5SP481-201ENST00000516814 122 ntBASIC0.97□□□□□ -2.25
TPM4P67936 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.97□□□□□ -2.25
TPM4P67936 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.97□□□□□ -2.25
TPM4P67936 AC069114.2-201ENST00000604699 304 ntBASIC0.97□□□□□ -2.25
TPM4P67936 BCRP9-201ENST00000605312 388 ntBASIC0.97□□□□□ -2.25
TPM4P67936 AC010615.1-201ENST00000594254 1764 ntBASIC0.97□□□□□ -2.25
TPM4P67936 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TPM4P67936 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TPM4P67936 RNY3P13-201ENST00000365542 102 ntBASIC0.96□□□□□ -2.26
TPM4P67936 RNU6-769P-201ENST00000384407 104 ntBASIC0.96□□□□□ -2.26
TPM4P67936 RNU2-7P-201ENST00000410794 178 ntBASIC0.96□□□□□ -2.26
TPM4P67936 AC004965.1-201ENST00000413033 213 ntBASIC0.96□□□□□ -2.26
TPM4P67936 AP1B1P2-201ENST00000416196 106 ntBASIC0.96□□□□□ -2.26
TPM4P67936 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.96□□□□□ -2.26
TPM4P67936 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
TPM4P67936 TXNL1P1-201ENST00000429528 554 ntBASIC0.96□□□□□ -2.26
TPM4P67936 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.96□□□□□ -2.26
TPM4P67936 AL121890.1-201ENST00000435457 205 ntBASIC0.96□□□□□ -2.26
TPM4P67936 AC132479.1-201ENST00000449160 144 ntBASIC0.96□□□□□ -2.26
TPM4P67936 AL163195.1-201ENST00000496941 348 ntBASIC0.96□□□□□ -2.26
TPM4P67936 RNU5A-4P-201ENST00000516588 111 ntBASIC0.96□□□□□ -2.26
TPM4P67936 SNORD60.2-201ENST00000516883 86 ntBASIC0.96□□□□□ -2.26
TPM4P67936 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.96□□□□□ -2.26
TPM4P67936 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.96□□□□□ -2.26
TPM4P67936 MIR3146-201ENST00000580367 79 ntBASIC0.96□□□□□ -2.26
TPM4P67936 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.96□□□□□ -2.26
TPM4P67936 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
TPM4P67936 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TPM4P67936 AL391987.6-201ENST00000305671 199 ntBASIC0.95□□□□□ -2.26
TPM4P67936 Y_RNA.192-201ENST00000363977 102 ntBASIC0.95□□□□□ -2.26
TPM4P67936 RNU6-960P-201ENST00000364056 120 ntBASIC0.95□□□□□ -2.26
TPM4P67936 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
TPM4P67936 MIR194-1-201ENST00000384892 85 ntBASIC0.95□□□□□ -2.26
TPM4P67936 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
TPM4P67936 RN7SKP61-201ENST00000410642 295 ntBASIC0.95□□□□□ -2.26
TPM4P67936 RNU2-62P-201ENST00000410868 191 ntBASIC0.95□□□□□ -2.26
TPM4P67936 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.95□□□□□ -2.26
TPM4P67936 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.95□□□□□ -2.26
TPM4P67936 MTND4P20-201ENST00000424125 869 ntBASIC0.95□□□□□ -2.26
TPM4P67936 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.95□□□□□ -2.26
TPM4P67936 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
TPM4P67936 BX284668.6-201ENST00000606899 438 ntBASIC0.95□□□□□ -2.26
TPM4P67936 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
TPM4P67936 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
TPM4P67936 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.95□□□□□ -2.26
TPM4P67936 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TPM4P67936 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TPM4P67936 RPS3AP36-201ENST00000398190 775 ntBASIC0.94□□□□□ -2.26
TPM4P67936 AC099677.2-201ENST00000436385 175 ntBASIC0.94□□□□□ -2.26
TPM4P67936 PRPS1P1-201ENST00000445305 876 ntBASIC0.94□□□□□ -2.26
TPM4P67936 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM4P67936 AC112198.4-201ENST00000515450 351 ntBASIC0.94□□□□□ -2.26
TPM4P67936 RNU5F-2P-201ENST00000516066 82 ntBASIC0.94□□□□□ -2.26
TPM4P67936 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM4P67936 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM4P67936 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.94□□□□□ -2.26
TPM4P67936 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM4P67936 MIR544B-201ENST00000582372 78 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms