Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC007792.1-201ENST00000623023 402 ntBASIC2.1□□□□□ -2.07
RPS4XP62701 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS4XP62701 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS4XP62701 AC002543.1-201ENST00000299783 1954 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 RNU6-105P-201ENST00000363909 104 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 RNU6-266P-201ENST00000364225 107 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 RNU1-91P-201ENST00000364746 163 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 MTCO3P40-201ENST00000392516 676 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS4XP62701 AC016907.1-201ENST00000419483 435 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AL591043.1-201ENST00000432461 424 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 SRRM1P2-201ENST00000464531 1192 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 RPL9P6-201ENST00000492764 598 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 RPS29P21-201ENST00000496272 170 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 RNU1-104P-201ENST00000517280 175 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 COPS8P3-201ENST00000526024 482 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 CBX3P7-201ENST00000532876 502 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS4XP62701 MIR4446-201ENST00000578505 67 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS4XP62701 RPL30P11-203ENST00000598995 310 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 Z82243.1-201ENST00000609432 473 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 U2.17-201ENST00000611454 95 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS4XP62701 AL159153.1-201ENST00000619688 317 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 AL359880.1-201ENST00000621879 266 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 MIR7843-201ENST00000622274 79 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 MIR6766-201ENST00000622641 72 ntBASIC2.09□□□□□ -2.07
RPS4XP62701 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
RPS4XP62701 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPS4XP62701 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS4XP62701 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPS4XP62701 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 RNU6-527P-201ENST00000363425 104 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 Y_RNA.409-201ENST00000383990 98 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 Y_RNA.436-201ENST00000384097 102 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL606923.1-201ENST00000406616 190 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AF274854.1-201ENST00000413236 615 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL139415.2-201ENST00000431968 163 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 RPL7P54-201ENST00000438336 674 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 PSPHP1-201ENST00000450062 261 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC013470.1-201ENST00000453438 462 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS4XP62701 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS4XP62701 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS4XP62701 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS4XP62701 RNU6-377P-201ENST00000515965 102 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC069113.1-201ENST00000517763 267 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.08□□□□□ -2.08
RPS4XP62701 AC022880.1-201ENST00000534017 973 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.08□□□□□ -2.08
RPS4XP62701 AC090115.3-201ENST00000553218 849 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.08□□□□□ -2.08
RPS4XP62701 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.08□□□□□ -2.08
RPS4XP62701 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.08□□□□□ -2.08
RPS4XP62701 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL136363.2-201ENST00000604173 851 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL049779.4-201ENST00000604500 156 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 APOOP1-201ENST00000604695 592 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL355297.2-201ENST00000604792 129 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AC123912.5-201ENST00000605470 343 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 HULC.1-201ENST00000612720 240 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 FO624990.1-201ENST00000636373 85 ntBASIC2.08□□□□□ -2.08
RPS4XP62701 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.08□□□□□ -2.08
RPS4XP62701 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
RPS4XP62701 RNU6-655P-201ENST00000362858 107 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 RNU6-1085P-201ENST00000363576 107 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 RNU6-1210P-201ENST00000363775 107 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 MTCO3P41-201ENST00000414801 328 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 DPH3P2-201ENST00000422618 250 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 VN1R108P-201ENST00000431580 830 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS4XP62701 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.07□□□□□ -2.08
RPS4XP62701 MTND1P1-201ENST00000445453 368 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AL121594.1-201ENST00000475906 575 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 CKS1BP2-201ENST00000497342 240 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 CCDC34P1-201ENST00000507441 517 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS4XP62701 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS4XP62701 SNORA48.11-201ENST00000517015 89 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS4XP62701 CYCSP27-201ENST00000527643 293 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 VN1R107P-201ENST00000601784 209 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
RPS4XP62701 AC008121.3-201ENST00000618726 433 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 AL160394.1-201ENST00000624765 724 ntBASIC2.07□□□□□ -2.08
RPS4XP62701 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms