Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.21□□□□□ -1.9
CLRN1P58418 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLRN1P58418 AC233263.6-201ENST00000631132 1963 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLRN1P58418 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLRN1P58418 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.9
CLRN1P58418 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLRN1P58418 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLRN1P58418 SNORD115-32-201ENST00000364079 82 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 RNA5SP479-201ENST00000364858 117 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 Y_RNA.307-201ENST00000365022 117 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 RNU6-1318P-201ENST00000365389 103 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 Y_RNA.458-201ENST00000384240 102 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 RNU6-611P-201ENST00000384276 104 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 Y_RNA.476-201ENST00000384347 108 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 MT-TW-201ENST00000387382 68 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 MIR1302-6-201ENST00000408466 90 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.2□□□□□ -1.9
CLRN1P58418 RPS15AP5-201ENST00000436276 388 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 GPM6BP3-201ENST00000442797 145 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.2□□□□□ -1.9
CLRN1P58418 RNU6-1143P-201ENST00000516125 104 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 MIR2355-201ENST00000517199 87 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 IGKV2-23-201ENST00000518729 323 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 CKS1BP7-201ENST00000522230 235 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 AP002770.2-201ENST00000543613 532 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 AC007375.1-201ENST00000554513 578 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.2□□□□□ -1.9
CLRN1P58418 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 RMST_6.1-201ENST00000611980 203 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 AC130454.1-201ENST00000622948 401 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 AP003355.3-201ENST00000623465 114 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 U6.92-201ENST00000636464 89 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 U6.98-201ENST00000637157 84 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 RBBP8P1-201ENST00000449447 1844 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLRN1P58418 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLRN1P58418 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
CLRN1P58418 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLRN1P58418 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 AC073073.2-201ENST00000609827 2578 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.19□□□□□ -1.9
CLRN1P58418 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 HAUS6P2-201ENST00000433254 2404 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 RNU5B-2P-201ENST00000363036 113 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 Y_RNA.105-201ENST00000363182 111 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 RNU6-1141P-201ENST00000364520 107 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 Y_RNA.376-201ENST00000365638 108 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 SNORA36A-201ENST00000384221 132 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.19□□□□□ -1.9
CLRN1P58418 RNU7-170P-201ENST00000459303 61 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 AC016632.1-201ENST00000503994 196 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 RNU6-408P-201ENST00000515910 100 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 AC022868.1-201ENST00000517767 391 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
CLRN1P58418 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 AC016256.1-201ENST00000547971 354 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.19□□□□□ -1.9
CLRN1P58418 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.19□□□□□ -1.9
CLRN1P58418 MIR3668-201ENST00000582138 75 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
CLRN1P58418 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.19□□□□□ -1.9
CLRN1P58418 AC004944.1-201ENST00000517807 3059 ntBASIC3.19□□□□□ -1.9
CLRN1P58418 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLRN1P58418 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLRN1P58418 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.19□□□□□ -1.9
CLRN1P58418 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.18□□□□□ -1.9
CLRN1P58418 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLRN1P58418 AP001148.1-201ENST00000624124 2359 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 OR56A5-201ENST00000340110 738 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 Y_RNA.183-201ENST00000363882 113 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RNA5SP42-201ENST00000364278 115 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 Y_RNA.288-201ENST00000364854 92 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.18□□□□□ -1.9
CLRN1P58418 RNU6-622P-201ENST00000384272 103 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 Y_RNA.483-201ENST00000384380 101 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RNY3P4-201ENST00000384428 101 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 U8.11-201ENST00000384699 133 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 U8.12-201ENST00000384701 133 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 MIR153-2-201ENST00000385225 87 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RNA5SP390-201ENST00000410191 113 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 RPL39P29-201ENST00000447779 157 ntBASIC3.18□□□□□ -1.9
CLRN1P58418 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms