Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC244517.12-201ENST00000623581 663 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC138627.2-201ENST00000624202 601 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLDN20P56880 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
CLDN20P56880 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
CLDN20P56880 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN20P56880 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CLDN20P56880 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN20P56880 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.58□□□□□ -2
CLDN20P56880 SNORA80A-201ENST00000363922 136 ntBASIC2.58□□□□□ -2
CLDN20P56880 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN20P56880 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN20P56880 AL512633.1-201ENST00000399931 655 ntBASIC2.58□□□□□ -2
CLDN20P56880 MIR548K-201ENST00000408406 116 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.58□□□□□ -2
CLDN20P56880 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
CLDN20P56880 MTND1P11-201ENST00000456661 876 ntBASIC2.58□□□□□ -2
CLDN20P56880 AP001486.1-201ENST00000463339 476 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC096576.1-201ENST00000489014 359 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.58□□□□□ -2
CLDN20P56880 RPL39P5-202ENST00000512505 151 ntBASIC2.58□□□□□ -2
CLDN20P56880 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
CLDN20P56880 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC105029.1-201ENST00000520250 669 ntBASIC2.58□□□□□ -2
CLDN20P56880 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.58□□□□□ -2
CLDN20P56880 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.58□□□□□ -2
CLDN20P56880 BNIP3P16-201ENST00000589779 534 ntBASIC2.58□□□□□ -2
CLDN20P56880 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
CLDN20P56880 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.58□□□□□ -2
CLDN20P56880 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN20P56880 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
CLDN20P56880 RBBP8P1-201ENST00000449447 1844 ntBASIC2.57□□□□□ -2
CLDN20P56880 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
CLDN20P56880 MIR548F5-201ENST00000408421 86 ntBASIC2.57□□□□□ -2
CLDN20P56880 RNU2-41P-201ENST00000410991 178 ntBASIC2.57□□□□□ -2
CLDN20P56880 AL030996.1-201ENST00000411430 235 ntBASIC2.57□□□□□ -2
CLDN20P56880 AC074085.1-201ENST00000413598 418 ntBASIC2.57□□□□□ -2
CLDN20P56880 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.57□□□□□ -2
CLDN20P56880 SNRPEP8-201ENST00000442866 260 ntBASIC2.57□□□□□ -2
CLDN20P56880 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.57□□□□□ -2
CLDN20P56880 AC107399.1-201ENST00000451226 265 ntBASIC2.57□□□□□ -2
CLDN20P56880 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
CLDN20P56880 MTND5P5-201ENST00000503764 376 ntBASIC2.57□□□□□ -2
CLDN20P56880 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
CLDN20P56880 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
CLDN20P56880 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.57□□□□□ -2
CLDN20P56880 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
CLDN20P56880 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
CLDN20P56880 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.57□□□□□ -2
CLDN20P56880 AC099654.5-201ENST00000636479 350 ntBASIC2.57□□□□□ -2
CLDN20P56880 MTND4P23-201ENST00000447723 1363 ntBASIC2.57□□□□□ -2
CLDN20P56880 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.57□□□□□ -2
CLDN20P56880 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.57□□□□□ -2
CLDN20P56880 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN20P56880 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.56□□□□□ -2
CLDN20P56880 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN20P56880 SNORD62.1-201ENST00000362541 86 ntBASIC2.56□□□□□ -2
CLDN20P56880 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
CLDN20P56880 Y_RNA.339-201ENST00000365325 102 ntBASIC2.56□□□□□ -2
CLDN20P56880 RNU6-1083P-201ENST00000384022 107 ntBASIC2.56□□□□□ -2
CLDN20P56880 MIR181A2-201ENST00000384863 110 ntBASIC2.56□□□□□ -2
CLDN20P56880 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
CLDN20P56880 U3.26-201ENST00000391236 204 ntBASIC2.56□□□□□ -2
CLDN20P56880 RN7SKP158-201ENST00000410453 326 ntBASIC2.56□□□□□ -2
CLDN20P56880 RNU6-1245P-201ENST00000411130 106 ntBASIC2.56□□□□□ -2
CLDN20P56880 RNU6-293P-201ENST00000411259 106 ntBASIC2.56□□□□□ -2
CLDN20P56880 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.56□□□□□ -2
CLDN20P56880 AC007969.2-201ENST00000441891 191 ntBASIC2.56□□□□□ -2
CLDN20P56880 RNU7-187P-201ENST00000458985 68 ntBASIC2.56□□□□□ -2
CLDN20P56880 U8.21-201ENST00000459536 136 ntBASIC2.56□□□□□ -2
CLDN20P56880 AP001324.2-201ENST00000461163 319 ntBASIC2.56□□□□□ -2
CLDN20P56880 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
CLDN20P56880 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
CLDN20P56880 RPS27P27-201ENST00000498779 255 ntBASIC2.56□□□□□ -2
CLDN20P56880 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
CLDN20P56880 FGF7P4-201ENST00000509595 295 ntBASIC2.56□□□□□ -2
CLDN20P56880 CKS1BP7-201ENST00000522230 235 ntBASIC2.56□□□□□ -2
CLDN20P56880 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.56□□□□□ -2
CLDN20P56880 RPL23AP78-201ENST00000599928 470 ntBASIC2.56□□□□□ -2
CLDN20P56880 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
CLDN20P56880 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
CLDN20P56880 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
CLDN20P56880 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLDN20P56880 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN20P56880 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.56□□□□□ -2
CLDN20P56880 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
CLDN20P56880 RNU6-622P-201ENST00000384272 103 ntBASIC2.55□□□□□ -2
CLDN20P56880 RNU6-933P-201ENST00000384424 107 ntBASIC2.55□□□□□ -2
CLDN20P56880 MT-TD-201ENST00000387419 68 ntBASIC2.55□□□□□ -2
CLDN20P56880 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLDN20P56880 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.55□□□□□ -2
CLDN20P56880 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN20P56880 RNA5SP390-201ENST00000410191 113 ntBASIC2.55□□□□□ -2
CLDN20P56880 RNU6-325P-201ENST00000411132 105 ntBASIC2.55□□□□□ -2
CLDN20P56880 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.55□□□□□ -2
CLDN20P56880 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN20P56880 AL513043.1-201ENST00000439124 535 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms