Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PER3P56645 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PER3P56645 AC009541.1-201ENST00000438279 2662 ntBASIC3.34□□□□□ -1.87
PER3P56645 RNU6-26P-201ENST00000383985 107 ntBASIC3.34□□□□□ -1.87
PER3P56645 Y_RNA.557-201ENST00000384680 107 ntBASIC3.34□□□□□ -1.87
PER3P56645 HLFP1-201ENST00000402375 499 ntBASIC3.34□□□□□ -1.87
PER3P56645 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.34□□□□□ -1.87
PER3P56645 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
PER3P56645 MTCYBP10-201ENST00000424905 650 ntBASIC3.34□□□□□ -1.87
PER3P56645 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
PER3P56645 RPS15AP5-201ENST00000436276 388 ntBASIC3.34□□□□□ -1.87
PER3P56645 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.34□□□□□ -1.87
PER3P56645 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.34□□□□□ -1.87
PER3P56645 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
PER3P56645 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
PER3P56645 AL590705.4-201ENST00000532209 134 ntBASIC3.34□□□□□ -1.87
PER3P56645 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.34□□□□□ -1.87
PER3P56645 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
PER3P56645 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
PER3P56645 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
PER3P56645 AP000942.4-201ENST00000604811 241 ntBASIC3.34□□□□□ -1.87
PER3P56645 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
PER3P56645 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.34□□□□□ -1.87
PER3P56645 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PER3P56645 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.34□□□□□ -1.88
PER3P56645 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 RNU1-140P-201ENST00000365040 165 ntBASIC3.33□□□□□ -1.88
PER3P56645 RNU6-574P-201ENST00000384265 107 ntBASIC3.33□□□□□ -1.88
PER3P56645 RNU6-843P-201ENST00000384454 104 ntBASIC3.33□□□□□ -1.88
PER3P56645 MIR625-201ENST00000385047 85 ntBASIC3.33□□□□□ -1.88
PER3P56645 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PER3P56645 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PER3P56645 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.33□□□□□ -1.88
PER3P56645 RPL23AP95-201ENST00000426806 265 ntBASIC3.33□□□□□ -1.88
PER3P56645 AC092423.1-201ENST00000430165 186 ntBASIC3.33□□□□□ -1.88
PER3P56645 Z82188.1-201ENST00000436709 154 ntBASIC3.33□□□□□ -1.88
PER3P56645 HMGN2P20-201ENST00000437531 273 ntBASIC3.33□□□□□ -1.88
PER3P56645 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.33□□□□□ -1.88
PER3P56645 AL161651.1-201ENST00000440882 223 ntBASIC3.33□□□□□ -1.88
PER3P56645 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.33□□□□□ -1.88
PER3P56645 AL513124.1-201ENST00000450410 614 ntBASIC3.33□□□□□ -1.88
PER3P56645 RNU7-169P-201ENST00000459456 61 ntBASIC3.33□□□□□ -1.88
PER3P56645 RNU7-23P-201ENST00000459465 62 ntBASIC3.33□□□□□ -1.88
PER3P56645 RPL30P1-201ENST00000488676 339 ntBASIC3.33□□□□□ -1.88
PER3P56645 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.33□□□□□ -1.88
PER3P56645 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.33□□□□□ -1.88
PER3P56645 RNU7-4P-201ENST00000516961 62 ntBASIC3.33□□□□□ -1.88
PER3P56645 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.33□□□□□ -1.88
PER3P56645 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
PER3P56645 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.33□□□□□ -1.88
PER3P56645 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
PER3P56645 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
PER3P56645 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
PER3P56645 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PER3P56645 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PER3P56645 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
PER3P56645 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PER3P56645 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PER3P56645 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
PER3P56645 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.106-201ENST00000363189 100 ntBASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.389-201ENST00000383924 113 ntBASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.405-201ENST00000383979 100 ntBASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.451-201ENST00000384200 100 ntBASIC3.32□□□□□ -1.88
PER3P56645 RNU6-622P-201ENST00000384272 103 ntBASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.524-201ENST00000384564 100 ntBASIC3.32□□□□□ -1.88
PER3P56645 Y_RNA.561-201ENST00000384694 100 ntBASIC3.32□□□□□ -1.88
PER3P56645 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
PER3P56645 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
PER3P56645 RNU6-700P-201ENST00000391043 107 ntBASIC3.32□□□□□ -1.88
PER3P56645 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
PER3P56645 AL358453.1-201ENST00000422522 250 ntBASIC3.32□□□□□ -1.88
PER3P56645 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.32□□□□□ -1.88
PER3P56645 AC124916.1-201ENST00000444020 547 ntBASIC3.32□□□□□ -1.88
PER3P56645 RN7SKP210-201ENST00000459176 261 ntBASIC3.32□□□□□ -1.88
PER3P56645 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.32□□□□□ -1.88
PER3P56645 RPL22P13-201ENST00000493291 347 ntBASIC3.32□□□□□ -1.88
PER3P56645 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
PER3P56645 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
PER3P56645 SNORA40.14-201ENST00000516543 86 ntBASIC3.32□□□□□ -1.88
PER3P56645 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 HSBP1P1-201ENST00000555205 166 ntBASIC3.32□□□□□ -1.88
PER3P56645 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.32□□□□□ -1.88
PER3P56645 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
PER3P56645 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 AC010928.2-201ENST00000588017 287 ntBASIC3.32□□□□□ -1.88
PER3P56645 AC091152.3-201ENST00000604227 325 ntBASIC3.32□□□□□ -1.88
PER3P56645 AC006077.1-201ENST00000604746 343 ntBASIC3.32□□□□□ -1.88
PER3P56645 SNORA43.4-201ENST00000629559 138 ntBASIC3.32□□□□□ -1.88
PER3P56645 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
PER3P56645 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PER3P56645 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.32□□□□□ -1.88
PER3P56645 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms