Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RNU6-15P-201ENST00000384534 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNU6-2-201ENST00000384627 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNU6-29P-201ENST00000384637 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNU6-9-201ENST00000384776 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNU6-700P-201ENST00000391043 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
FOXG1P55316 RPL23AP82-202ENST00000427528 469 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 HMGN2P20-201ENST00000437531 273 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
FOXG1P55316 CENPBD1P1-201ENST00000464061 469 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AC133134.1-201ENST00000466800 359 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXG1P55316 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 RPS15AP34-201ENST00000487776 387 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 PHBP14-201ENST00000512887 367 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 APOOP4-201ENST00000513530 597 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNU5B-3P-201ENST00000516601 115 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 Y_RNA.700-201ENST00000516806 100 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 RNA5SP471-201ENST00000516971 106 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AC107934.2-201ENST00000518653 310 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 AC004024.1-201ENST00000549244 247 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 SYF2P1-201ENST00000550658 413 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 TGIF1P1-201ENST00000558095 802 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 MIR5701-3-201ENST00000578890 82 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 MIR5701-1-201ENST00000585138 82 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 RNU6-6P-201ENST00000606623 107 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 MIR5701-2-201ENST00000615634 82 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.9□□□□□ -1.95
FOXG1P55316 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXG1P55316 ZNF299P-201ENST00000406845 1804 ntBASIC2.9□□□□□ -1.95
FOXG1P55316 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
FOXG1P55316 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXG1P55316 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
FOXG1P55316 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXG1P55316 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
FOXG1P55316 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXG1P55316 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXG1P55316 AC002546.1-201ENST00000588041 2504 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXG1P55316 RNU1-76P-201ENST00000362903 159 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 RNU6-512P-201ENST00000364438 103 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 Y_RNA.269-201ENST00000364685 89 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 RNU6-886P-201ENST00000384319 105 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 SDAD1P3-201ENST00000427380 333 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 MTATP6P4-201ENST00000427725 675 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 AC104332.1-201ENST00000440471 797 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 RNU6-1037P-201ENST00000459571 107 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXG1P55316 AC010469.2-201ENST00000496412 480 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 AC008716.1-201ENST00000511084 513 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.89□□□□□ -1.95
FOXG1P55316 RNU6-911P-201ENST00000516523 104 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 TRAV37-201ENST00000553906 342 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.89□□□□□ -1.95
FOXG1P55316 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXG1P55316 MIR5696-201ENST00000578474 85 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 MIR3910-1-201ENST00000580936 111 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
FOXG1P55316 BDH2P1-201ENST00000602288 736 ntBASIC2.89□□□□□ -1.95
FOXG1P55316 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
FOXG1P55316 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
FOXG1P55316 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
FOXG1P55316 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXG1P55316 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXG1P55316 SDAD1P2-201ENST00000441308 2028 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXG1P55316 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXG1P55316 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXG1P55316 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 MTND5P9-201ENST00000503854 1755 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXG1P55316 DEFB108F-201ENST00000344638 222 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 MIR335-201ENST00000362173 94 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 Y_RNA.16-201ENST00000362421 102 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 AP002088.1-201ENST00000382740 395 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 RNU6-746P-201ENST00000384112 109 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
FOXG1P55316 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXG1P55316 AC096920.1-201ENST00000423991 241 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXG1P55316 RPL23AP22-201ENST00000437556 453 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 RPL26P6-201ENST00000440913 438 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXG1P55316 RPL23AP67-201ENST00000465341 474 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 AP002884.2-201ENST00000471647 395 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXG1P55316 MIR892C-201ENST00000516410 77 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.88□□□□□ -1.95
FOXG1P55316 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms